Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2114 |
Symbol | |
ID | 4693407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2402769 |
End bp | 2403692 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849877 |
Product | LysR family transcriptional regulator |
Protein accession | YP_996881 |
Protein GI | 121609074 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.307366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATT GGAACCTGCG CCAGCTACGC CTGTTCGAGG CCGTGGCCCT GCACCTGAGC TACTCGCGCG CGGCACAGCA AATGAACCTG ACGCAACCGG CCGTGTCGAT GCAGGTGCAG CAGCTCGAAA CGGAACTGGG CCTGCAATTG CTGGTGAAAA CCGGCAAGCG GATCCGCCTG AGCCAGGCGG GCGAGGAAAT GCTGCGCCAG ACCCGCCGCA TCCTGAACCA GGTGCGCATG GCCGAAGAAG CCATGGCGGC CTACCATCAG ACCGAAGGCG GCAGCGGCGG GCTGCTGCAC CTGGGCGTGG TGCCCACCGC CCACTACTTC GCGCCGGCGC TGCTGATGGC CTTTGCCCGG CAATGGCCGG GCGTGAAATT CAAGCTGACG GTGGATCGGC GCGACCAGAT CCTGAGCATG CTGCGCGAGC ACCAACTCGA CCTGGCCATC GCCGGCTACC CGCCATCCGA AGCCGACGTG GAGGCCGAGA CCTTCGCCCA GCACCCGCAC TGCATCGTCG CCGCAGCCAG CCACCCGCTG GCCCCACAGC GGCGCATCCG CTGGGATGCG TTGCGCGACG AATCCTTCAT CTTTCGCGAA CCCGGCTCGG CCACCAGGCA GTTTTTCGAG CACCTGCTGC AAGCCCAGGC GCTACAGGTC AAGGTATCGA TGGAGCTGTC GGGCAACGAA ACCATCAAGC AGGCCGTGAT GGCCGGCATG GGCATCAGCT TTCTGTCGGC CCACACCTTC CAGATCGAAC TGCAGGCCGC CCGCCTGGCC GTGCTCGACC TGCAAGACAT GCCCAAAATG CTCGACTGGT GCCTGCTCAA CCGCCGCGAC TCCACACTGT CGGGCGTCAA CGGCGCATTC AAGGCCTTCG TGCTGGAACA AGGCTCCGAT CTGGCCCAAT GCCGGCTGCG CTAA
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Protein sequence | MKHWNLRQLR LFEAVALHLS YSRAAQQMNL TQPAVSMQVQ QLETELGLQL LVKTGKRIRL SQAGEEMLRQ TRRILNQVRM AEEAMAAYHQ TEGGSGGLLH LGVVPTAHYF APALLMAFAR QWPGVKFKLT VDRRDQILSM LREHQLDLAI AGYPPSEADV EAETFAQHPH CIVAAASHPL APQRRIRWDA LRDESFIFRE PGSATRQFFE HLLQAQALQV KVSMELSGNE TIKQAVMAGM GISFLSAHTF QIELQAARLA VLDLQDMPKM LDWCLLNRRD STLSGVNGAF KAFVLEQGSD LAQCRLR
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