| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2045 |
|---|
| Symbol | |
|---|
| ID | 4691632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2321246 |
|---|
| End bp | 2322274 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639849809 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_996813 |
|---|
| Protein GI | 121609006 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.459231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGT CCACGCCGCC CACCTCGCCG CCGGCCACGC CACTGGCTGC ATCACAGGCC
ACGCAGGCGC CGGCGGTCAG CGCCAGGCCA GCGCGCCGCT GGCGCCATCT GCTGGCCGAC
TACGGCATCT TCATCGCCTT TGCCGTGCTG TGCGTGGTTC TTGGCATCGC GCAAGAGAGC
TTCCTGACCT GGGGCAACTG GGTCAACGTG CTGCGCCAGA CCTCGATCAA CGCCATCCTC
GCGATCGGCA TGACCTGCGT CATCCTGACC CGGGGCATAG ACCTGTCGGT AGGCTCGCTG
CTGGCGTTCT CGGGGCTGGT GGCGGCCAGC TTCGTCAGCG GCGACAACGT CAGCCTGGCG
CTGGCGCTGG CTGGCGGACT GGGCGCCGGG CTGCTGCTCG GCATGCTCAA CGGCGCGCTG
GTGGCAAGGC TGTCGGTGCA GCCCTTCGTG GTCACGCTGG GCATGTTGAG CGTGGCCCGC
GGCCTGACCT TCATCTACAA CGACGGCATG CCGATCGCGG GCCTGGCGCC ATCGTTTCGC
TTCATCGGCC AGGGCATGAT CGGCGGTCTG CCGGTGCCGG TGCTGATTCT GGCCGCCACC
TTCGGGCTGT TCTGGTTCGT GCTCAAGTAC ACGGCCTTTG GCCGCTACAT CTACGCCGTT
GGCGGCAACG AGAAAAGCGC GCGCACCAGC GGCATCCGCA CCAAGTGGGT GATCTTCTGG
GTGTATGCGA TCTCGGGCCT GCTGTCGGCG CTGGCCGGGA TCATTCTGGC TGCGCGCACC
ACGTCGGCGC TGCCGCAGGC CGGCGTGGCC TACGAGCTGG ACGCGATCGC CGCCGTCGTC
ATCGGCGGCA CCAGTCTGAG CGGCGGCGTC GGCACGCTCA GCGGCACGCT GGTCGGGGCC
TTGATCATCG GCGTCATCAA CAACGGCTTG GATCTGCTGG GCGTGTCTTC GTACTACCAG
CAGGTCATCA AGGGCGTGAT CATCGTGGTG GCCGTGCTGC TCGATGTGTC GCGCAAGCAG
CAGGGCTGA
|
|---|
| Protein sequence | MSMSTPPTSP PATPLAASQA TQAPAVSARP ARRWRHLLAD YGIFIAFAVL CVVLGIAQES
FLTWGNWVNV LRQTSINAIL AIGMTCVILT RGIDLSVGSL LAFSGLVAAS FVSGDNVSLA
LALAGGLGAG LLLGMLNGAL VARLSVQPFV VTLGMLSVAR GLTFIYNDGM PIAGLAPSFR
FIGQGMIGGL PVPVLILAAT FGLFWFVLKY TAFGRYIYAV GGNEKSARTS GIRTKWVIFW
VYAISGLLSA LAGIILAART TSALPQAGVA YELDAIAAVV IGGTSLSGGV GTLSGTLVGA
LIIGVINNGL DLLGVSSYYQ QVIKGVIIVV AVLLDVSRKQ QG
|
|---|
| |