Gene Veis_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2042 
Symbol 
ID4692770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2318844 
End bp2319323 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID639849806 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_996810 
Protein GI121609003 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.673423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC CCATGAAAAT CGCCATCGGC TGCGACGAGG CCGCCAACGC CATGAAAGAC 
TGCCTGAAGG CCGCATTGCT GGCCCAGGGC CACCAGGTGA CGGACTTCGG CACCCATGAC
CACCAGCCGG TGCTGTACCC GGACATCGGC ATCGCGGTGG CGCAGGCCAT CGCGCGCGGC
CAGGCCGAGC GCGGCCTGCT GCTGTGCGGC ACCGGCATCG GCATGGCGAT TGCAGCGAAC
AAGGTGCCGG GCATCCGCGC CGCGCAGGCG CACGACACCT ACAGCGCCGA GCGCGCCGCG
CTCAGCAACG ACGCGCACAT CATCACCATC GGCGCGCGCG TGATCGGCAT CGAACTGGCC
AAGAGCATCG TGCAGACCTT CCTGGCCGCG CAGTATGTTG CCGGGCCGCG CTCGCAACCC
AAGCTCGACG CGCTGGCAGC GCATGAGCAG CGGCTGCGGC AGGCCGGAGA CAGCGGCTGA
 
Protein sequence
MKTPMKIAIG CDEAANAMKD CLKAALLAQG HQVTDFGTHD HQPVLYPDIG IAVAQAIARG 
QAERGLLLCG TGIGMAIAAN KVPGIRAAQA HDTYSAERAA LSNDAHIITI GARVIGIELA
KSIVQTFLAA QYVAGPRSQP KLDALAAHEQ RLRQAGDSG