Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2042 |
Symbol | |
ID | 4692770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2318844 |
End bp | 2319323 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639849806 |
Product | RpiB/LacA/LacB family sugar-phosphate isomerase |
Protein accession | YP_996810 |
Protein GI | 121609003 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.673423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC CCATGAAAAT CGCCATCGGC TGCGACGAGG CCGCCAACGC CATGAAAGAC TGCCTGAAGG CCGCATTGCT GGCCCAGGGC CACCAGGTGA CGGACTTCGG CACCCATGAC CACCAGCCGG TGCTGTACCC GGACATCGGC ATCGCGGTGG CGCAGGCCAT CGCGCGCGGC CAGGCCGAGC GCGGCCTGCT GCTGTGCGGC ACCGGCATCG GCATGGCGAT TGCAGCGAAC AAGGTGCCGG GCATCCGCGC CGCGCAGGCG CACGACACCT ACAGCGCCGA GCGCGCCGCG CTCAGCAACG ACGCGCACAT CATCACCATC GGCGCGCGCG TGATCGGCAT CGAACTGGCC AAGAGCATCG TGCAGACCTT CCTGGCCGCG CAGTATGTTG CCGGGCCGCG CTCGCAACCC AAGCTCGACG CGCTGGCAGC GCATGAGCAG CGGCTGCGGC AGGCCGGAGA CAGCGGCTGA
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Protein sequence | MKTPMKIAIG CDEAANAMKD CLKAALLAQG HQVTDFGTHD HQPVLYPDIG IAVAQAIARG QAERGLLLCG TGIGMAIAAN KVPGIRAAQA HDTYSAERAA LSNDAHIITI GARVIGIELA KSIVQTFLAA QYVAGPRSQP KLDALAAHEQ RLRQAGDSG
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