| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2011 |
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| Symbol | |
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| ID | 4692688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2285200 |
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| End bp | 2286642 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639849777 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_996781 |
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| Protein GI | 121608974 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.427162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG CACTCAAAGC CCTCGCACGG GCATGCCACG ATCGGCGGCT GGAGCGTCGC
GAGTTTCTGG CGCGCGCCAG CGCCCTCGGT TTTGGCAGCA GCGCCGCCGG CCTGATGCTC
AATGCCGTGT CGACCCGGGC CCTCGCCCAG GACGGCGGCG TCGACTTCAT GAAGCACAAG
GGCAAGACCG TCAAACTGCT GCTGAACAAG CATCCGTATG TGGATGCGAT GGTCAAGAAC
ATCGAGAACT TCAAGGCCCT GACCGGCTTG AATGTCAGCT ACGACATCTT TCCGGAAGAT
GTCTACTTCG ACAAGGTGAC CGCAGCCCTG GCCAGCAAGA GCAGCCAGTA CGACGCTTTC
ATGACCGGCG CCTACCAGAC CTGGAAGTAC GGCCCGGCGC GCCAGATCGT CGACCTGAAC
CAGTACCTGC AAGACCCCAA GCTCACCTCG GCCAACTACG CCTGGGAGGA TATCTACCAG
AACCTGCGCG CCGCCACGTC CTGGGACGGC AAGGCCGGCT CCGCACTCGG CGGCCCGGGC
GCCAAGCAAT GGGCCTTGCC CTGGGGCTTC GAGCTCAACA GCCTGGCCTA CAACAAGCGC
CTGTTCGATG CGCTGAAACT GGGCGTGCCG ACCCACCTGG CGGACCTGGC GGACAAGGCC
GCCAGCATCA GCAAGAGCGG CAAGGGCTAC GGCATCGGCG TGCGCGGCTC GCGCAGTTGG
GCCACGATCC ATGCCGGCTT TTTGTCGGCG TACACCAACT TCGGCAACAA GGACTTCCAC
AGCGCGGGCG GCAAGCTGAC GCCGGCAATG AACACGCCGC AGAGCAAGCA GTTTCACCAG
CAGTGGATCG ACATGATCAA GAACGGCGGG CCGAAGAACT GGACCAACTA CACCTGGTAT
GAGGTCGGCA ACGATCTGGG CGCGGGCAAT AGCGCGATGA TCTACGACGC CGACATCATG
GGCTACTTCT TCAACAGCGG CAGCAACAAG GAAGCCGGCA ACCTGGCCTA CGCCGCGTTC
ACGCCGAACC CGGCCGCCAA GGCGCCCACG CCCAATATCT GGATCTGGTC GCTGGCGATG
AGCGAGTTCT CCAAACAAAA GGAGGCCGCC TGGTTCCTGC TGCAATGGGC CACCGGCACG
CAGAACACCA CCTTCGGCGC CACCCAGGGC GACTTGGTGA ACCCGGTGCG CAAATCGGTC
TGGGAAAACG CCCAGTTCAA GGAGCGGCTG GACAAGTCCT ACCCCGGCTA CCTGCGGCAA
TACCAGGCCA GCGTGGAGGG CGCGAAGATC TACTTCACGC CGCAGCAGTT GTTTCCCGAA
TTCACCACCG AGTGGGCGTC GATGCTGCAA CAGATGTACG GCGGCACGGT GCCGGTCGGC
GAGGGGCTGG ACAAACTGGC CGAGACGCTG ACCCGCAAGC TCAAGGGCGT GGGCCTGGCC
TGA
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| Protein sequence | MSEALKALAR ACHDRRLERR EFLARASALG FGSSAAGLML NAVSTRALAQ DGGVDFMKHK
GKTVKLLLNK HPYVDAMVKN IENFKALTGL NVSYDIFPED VYFDKVTAAL ASKSSQYDAF
MTGAYQTWKY GPARQIVDLN QYLQDPKLTS ANYAWEDIYQ NLRAATSWDG KAGSALGGPG
AKQWALPWGF ELNSLAYNKR LFDALKLGVP THLADLADKA ASISKSGKGY GIGVRGSRSW
ATIHAGFLSA YTNFGNKDFH SAGGKLTPAM NTPQSKQFHQ QWIDMIKNGG PKNWTNYTWY
EVGNDLGAGN SAMIYDADIM GYFFNSGSNK EAGNLAYAAF TPNPAAKAPT PNIWIWSLAM
SEFSKQKEAA WFLLQWATGT QNTTFGATQG DLVNPVRKSV WENAQFKERL DKSYPGYLRQ
YQASVEGAKI YFTPQQLFPE FTTEWASMLQ QMYGGTVPVG EGLDKLAETL TRKLKGVGLA
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