| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1978 |
|---|
| Symbol | |
|---|
| ID | 4692101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2247901 |
|---|
| End bp | 2250213 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639849744 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_996748 |
|---|
| Protein GI | 121608941 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02059] cyanobacterial long protein repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.206942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA CCCTCACCAT CAACGAAGAA GTCATCAAAG CCGGCGAGAC CGCCGAGGTC
AAGTTTGCTT TCGAGCCCAA TACCGACTAC TCCCTCGCCA TCGGAAGTGA CGGTCTGATC
CAGGGTCTGA CCTCCACTGG CGGCTCCGTC CGCAACGTCA TCGATCGTGG AGTCATCTAC
GGTCGCCGCG TCTATACCGC CACATTCACG CCTGACGCGA ACCTGGACAG AACCGAGTGC
AGCCTCGTCT ACGACGTTGC TGGCACCGGC AATGACGCCA CCAGCGCCAC CTTCATCGTC
GACACCCGGG CGCCCACTCT CACGGGCACC CCGACGATCA GCAACCCCAA CCTGACCCGC
GCCAACCAAG TAAGCACCAT CACCTTTGCC TTCTCCGAGC GGATAGCTCA GACCTCCTTC
ACGGCTCAGA CCTCCTTCAC GACGGCTGAC CTGACGATAC CGGCGGGCAT GGGCACGCTG
GAGAACCTGC GCACCACCGA CGGCGGCAGG TCTTGGCAGG TAGACCTGAG GGCGCCGGCC
AACCTGGCGG CCAACACCGA AGCGAAGGAC CTGCAGATCG GCATCAACAT GGCCGGCATC
ACCGATGTCG CGGGCAACCC GGGCACAGGC AACGTCAACC TCGTCACCTA CCACATCGAC
AACAAGCCGC CCAGCGCCAC CATCGACGTT ACGCTCTTCC CCGGCACGAT CGACAACGGC
AGACTGATCA CCATTACCAT CACCTTCGAC GAGGAAGTCA CCGGCTTTAC GGCAGACAAC
ATCGATTTCA GCAACGTCGA TGTCGGTGCC CGTCCCGGCG CCGACCAGAC AGGAGCGCTG
AACCGCTCAC CCGACGGCCG CACCTACACC ATCACCTACC CGGTCGCTTC GGGCATCGAG
GATGCCACCA ACACCGTCCG CCTGCTCAAC CTCCATACCA TTCGTGACAC CGCAGGCAAC
GCCGTAGCGG TCAACCCCAC CAGCAACAAC TTCGAGATCG ACACCCGGGC GCCCACGGTC
ACGGTCACGA TGGACAAAGA GCGCCTGACC GCTGGCGAAA CCGCCACCGT CACGTTCACC
TTCAGCGAGA CCGTCCCCGG CTTCAGCGAC ATTTCCATCG TTATGGGTGG CGCCAACGGC
TCTCTGAGCA ACCTGAGGCA GACCACAGCC GACGGCAGAA CCTGGACAGC CACCTTCACC
CCCACGGCCA GCCTGTCCAA CGCCCGCAGC CAGATCAGCG TGAATTACGA GGGCATCAGA
GACCGCTACG GCAACGGCGG CAGTGGTACG AGCGCAGCCC ACAACTACAC CGTAGACACC
GCCGTTTTTG CCATCATCAG CGCCACGGTG AACGGCAGGC AGTTGGTATT GCAGTACAGC
GATGAAACCG CGCTGGACCC GGAGCAGACC CATAACGCGC CCAACGATGC GTTTGTGGTG
CTGGTCGATG GCGTGCGCAA CAACGTCACC GGCGTGCTCG TGGATGCAGC GGCCAAGACC
ATCACGCTGA CGCTGGCCAA CGCCGTGACC TGGGGCCAGC AGGTGAGCGT CGCCTACAAC
GATCCCAGCA CCGGCAACGA CCCGCAAGCG GTGCAGGAGG CCACCACCGG CAACGACGCG
GCCAGTTTCG CGGCCAAGCC GGTGACCAAC CTCGCCCCGT CCCCGGTCGC ACCCGCCACA
CCGGGGGCGT CTGGAGGGTC TGGAGGGTCT GGGGCGCTGG ACTCCGACTA CGACAATGTG
CCCAACGCCC AGGAAAACCA GGCCCCCGGC CTGCTGCGCC CCGATGGCTC GGCCGGCACG
GATGGCGACG GCAACGGCGA CGGTATCCGG GACAGTGAGC AGGTCGCCGT CAGTTCGACC
CGCGACCAGA CCCTGGTGGC CGGCAGCCAG GACGGCAAGG TGATCCCCGG CAGCAACGCG
CGCATTACCG AACTGGTGCG CAGCGATGCC CCGACCAAGC TGCCCAAGGG CATGGAAATG
CCGCTCGGTC TGACGCAATT CAGGGTCGGC CTGTCCGAAG GCCGCAGCAC CGAGAGCTTC
AGCCTGTATG TGGACCCGGC CACCGGCGCC ACCGGCTACT GGGTCAAGAA CAGCGCCGGC
ACCTGGGTGA ACCTGGCCAG CGAACCCTAC GGCGGCAAGG TGAGCAGCGA AGGCGGGCGC
ACGCGGCTGG ACTTTCAGAT TCAGGACGGC GGCCAGTACG ACGCCGACGG ACTGGCCGAT
GGCAACATCA CCGCCCTTGG CGCCGCAGCG AAAATGCCGC TGTCCATCGT CGGGCAGTCG
GCCCAGGTCG AGTCGCATGG CTTTTGGTTC TAA
|
|---|
| Protein sequence | MATTLTINEE VIKAGETAEV KFAFEPNTDY SLAIGSDGLI QGLTSTGGSV RNVIDRGVIY
GRRVYTATFT PDANLDRTEC SLVYDVAGTG NDATSATFIV DTRAPTLTGT PTISNPNLTR
ANQVSTITFA FSERIAQTSF TAQTSFTTAD LTIPAGMGTL ENLRTTDGGR SWQVDLRAPA
NLAANTEAKD LQIGINMAGI TDVAGNPGTG NVNLVTYHID NKPPSATIDV TLFPGTIDNG
RLITITITFD EEVTGFTADN IDFSNVDVGA RPGADQTGAL NRSPDGRTYT ITYPVASGIE
DATNTVRLLN LHTIRDTAGN AVAVNPTSNN FEIDTRAPTV TVTMDKERLT AGETATVTFT
FSETVPGFSD ISIVMGGANG SLSNLRQTTA DGRTWTATFT PTASLSNARS QISVNYEGIR
DRYGNGGSGT SAAHNYTVDT AVFAIISATV NGRQLVLQYS DETALDPEQT HNAPNDAFVV
LVDGVRNNVT GVLVDAAAKT ITLTLANAVT WGQQVSVAYN DPSTGNDPQA VQEATTGNDA
ASFAAKPVTN LAPSPVAPAT PGASGGSGGS GALDSDYDNV PNAQENQAPG LLRPDGSAGT
DGDGNGDGIR DSEQVAVSST RDQTLVAGSQ DGKVIPGSNA RITELVRSDA PTKLPKGMEM
PLGLTQFRVG LSEGRSTESF SLYVDPATGA TGYWVKNSAG TWVNLASEPY GGKVSSEGGR
TRLDFQIQDG GQYDADGLAD GNITALGAAA KMPLSIVGQS AQVESHGFWF
|
|---|
| |