Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1943 |
Symbol | |
ID | 4691257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2178682 |
End bp | 2179545 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639849710 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_996714 |
Protein GI | 121608907 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCGAA CCATACCGGG CAAAAAGTGG TTGCGCTGGA TGCACAAGGC CTATCTCGGC CTGTTCCTGG CCTACCTGGC CCTGCCGCTG GCCGTCGTGG CCGTGTTTGC CTTCAACGAC TCGACCATCC CCTCGCTGCC GTGGAAGGGC TGGACGCTGG ACTGGTTCAT CGGCAACGGC AGCACGCGCA CCGGCATGTT GCGGGATGGC GAGATCGGCG CCAGCATCGG CCACTCCCTC ATCGTCGCCG CGCTGGTGAC GCTGTTGTCG ATAGGCTGCG GCACCACCAC TGCCTTCCTG TTCGAGCGCC ACGATTTCAA GGGCAAGAGC TTGCTCTACC TGCTCATGCT GATGCCGCTG GTCATCCCCG GCGTCATCCT CGGCATCGCC ATCCTGGCCT TCTCCAGCAC CCTCGCCAAC GGCCTGGAAA CCCACTTCGG CCTCAGCGTG GAAGCCCTGC GGCCCGGCCT GCTGCTGGTG ACGCTGGGGC AATTTTCCTT CATCGCCACC ATCGCCACCC TGGTCATTTC CGCCAGACTG CGCAAATTCG ACCGCTCGCT CGAAGAAGCC GCGCTGAACC TGGGCGCCGG CCCGCTCACC GTGCTGCGCA CCATCACCTT GCCGTACCTC TACCCCTCGA TGATCGGCTG CGGCGTGGTC GCCTTCCTCA TGTCCTTCGA GAACTTCAGC ACCACCTTGA TGCTGGTCGG CTCGGACGCC CCGCTCACCA TCACCATGTT CAACCGCATG CGCCAAGGCT CCACGCCCGA ACTCAACGCC GTCTCGCTGG CGCTGATGCT GGCCTCGGCG CTGCTGGGAC TGGTCAGCAT CCTGGCGCAA CACAAAAAAC CGCCAAGCGA ATAG
|
Protein sequence | MLRTIPGKKW LRWMHKAYLG LFLAYLALPL AVVAVFAFND STIPSLPWKG WTLDWFIGNG STRTGMLRDG EIGASIGHSL IVAALVTLLS IGCGTTTAFL FERHDFKGKS LLYLLMLMPL VIPGVILGIA ILAFSSTLAN GLETHFGLSV EALRPGLLLV TLGQFSFIAT IATLVISARL RKFDRSLEEA ALNLGAGPLT VLRTITLPYL YPSMIGCGVV AFLMSFENFS TTLMLVGSDA PLTITMFNRM RQGSTPELNA VSLALMLASA LLGLVSILAQ HKKPPSE
|
| |