Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1921 |
Symbol | |
ID | 4695019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2156137 |
End bp | 2156763 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639849688 |
Product | response regulator receiver protein |
Protein accession | YP_996692 |
Protein GI | 121608885 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.287441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0849999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTGA TTCCGAAAAA AGGCACGGTT TACGTGGTTG ACGACGACGA AGCCGTGCGC GACTCGCTGC AATGGCTGCT CGAAGGCAAG GACTACCGGG TGCGTTGTTT CGATTCGGCC GAAACCTTTC TGTCACGCTA CGACCCGCGC GAAGTGGCCT GCCTGATCGT GGACATCCGC ATGGGCGGCA TGACCGGGCT GGAACTGCAA GACCGCCTGG TCGAGCGCAA ATCGCCGCTG CCCATCGTCT TCATCACCGG CCATGGCGAC GTGCCCATGG CCGTGAACAC GATGAAGAAA GGCGCGCTGG ACTTCATCCA GAAACCCTTT GACGAGCCCG AACTGGTAGG GCTGGTCGAA CGCATGCTCG ACCATGCGCG CGAAGCCTTC GCCGACTACC AGCAGGCCGT CTGCCGCGAA GCGCTGCTGT CCAAGCTCAC CAGCCGCGAA GCGCAGGTGC TCGAACGCAT CGTCGCCGGC CGTCTGAACA AGCAAATCGC CGACGACCTG GGCATCAGCA TCAAAACGGT GGAAGCGCAC CGCGCCAACA TCATGGAAAA ACTCAACGCC AACACCGTGG CCGACCTGCT CAAGATCGCC CTGGGACAGA ACGCCCCCAA GGGTTGA
|
Protein sequence | MSLIPKKGTV YVVDDDEAVR DSLQWLLEGK DYRVRCFDSA ETFLSRYDPR EVACLIVDIR MGGMTGLELQ DRLVERKSPL PIVFITGHGD VPMAVNTMKK GALDFIQKPF DEPELVGLVE RMLDHAREAF ADYQQAVCRE ALLSKLTSRE AQVLERIVAG RLNKQIADDL GISIKTVEAH RANIMEKLNA NTVADLLKIA LGQNAPKG
|
| |