Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1870 |
Symbol | |
ID | 4692825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2091568 |
End bp | 2092644 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849637 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_996641 |
Protein GI | 121608834 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0220738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCCA TCTTCGGCTT GTCGGCGCAG GCGCAGACCG TCCAGATCGC CATCGCCGGC CCCATGAGCG GCTCCGTGGC CCAGTACGGG GATATGGTCA AAGCCGGCGT GCTGACGGCC ATCGAGCAGA TCAACGCCGC TGGCGCCGCC GGCGGCCACA AACTGGAGGC GGTCATGATG GACGACGCCT GCGAGCCCAA GCAGGCCGTG GCGGTGGCCA ACAAGATCGT CAGCCAGCGC ATCAAGTACG TGATCGGCCA TATGTGCTCG GGATCGACGA TCCCCGCGTC GGACATCTAT GAGAACGAGG GCATCGTGAT GGTGACGCCG TCGGCCACGG TGCCCCAGAT CACCGAGGGC AAGAAGCGCA AGTTCATCTT CCGCACCACG GGCCGCGACG ACCAGCAGGG GCCGGTGGCG GCCCGGCACA TCATCGCCAA AGTCCAGCCC GGGAAGGTTG CCGTGCTGCA CGACAAGCAG TCCTATGGCC AGGGCCTGGC CACCTCGGTG AAGAAGGTCC TGGATGAGGC CAAGGTTCCG GTGGTCCTGT TCGAGGGCGT CAACGCGGGC GACAGCGACT ATTCGGCGGT CATCACCAAG ATCAAAGCGC AGGGCGCGGA CTTCGTCTAC TTCGGCGGCT ACCACCCCGA GATGGGCCTG CTGCTGCGCC AGGCGCGCGA GCAGGGTGTG AAGGCGACCT TCATGGGCCC CGAAGGGGTG GGCAACAAGG ATGTGACGGC AATCGCCGGG CCGGCCTCCG AAGGGATGCT CGTGACACTG CCTGCGGACT TCTCGGAAGA CCCGGCCAAC GCCGCGCTCG TCAAAGCCTT TGCCGACAAG AAGCGCGACA TCAACGGCCC GTTCCAGTTG CCCGCATACG CAGCCGTGAA GATCATCGCC GACGCCATGG CGGGAACCAA GAGCGCCGAC CCGGCCAAGG TCGCGGCCTA CATGCACCAG AACGCCTTCC AGACCCCGAT CGGCAAGGTC GAGTACGACG CGCAGGGCGA CCTGAAGTCG TTCAAGTTCG TGGTCTTCAC CTGGCACAAG GACGCCACCA AGACGGCCGT CCATTGA
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Protein sequence | MLAIFGLSAQ AQTVQIAIAG PMSGSVAQYG DMVKAGVLTA IEQINAAGAA GGHKLEAVMM DDACEPKQAV AVANKIVSQR IKYVIGHMCS GSTIPASDIY ENEGIVMVTP SATVPQITEG KKRKFIFRTT GRDDQQGPVA ARHIIAKVQP GKVAVLHDKQ SYGQGLATSV KKVLDEAKVP VVLFEGVNAG DSDYSAVITK IKAQGADFVY FGGYHPEMGL LLRQAREQGV KATFMGPEGV GNKDVTAIAG PASEGMLVTL PADFSEDPAN AALVKAFADK KRDINGPFQL PAYAAVKIIA DAMAGTKSAD PAKVAAYMHQ NAFQTPIGKV EYDAQGDLKS FKFVVFTWHK DATKTAVH
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