Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1788 |
Symbol | |
ID | 4690913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1995579 |
End bp | 1996460 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849554 |
Product | hypothetical protein |
Protein accession | YP_996560 |
Protein GI | 121608753 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.192563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGTT ATCGCCACGC CTTCCACGCA GGCAACCATG CCGATGTGTT CAAGCACACG GTGTTGATCG CCACCCTGCA ATACCTCACC GACAAGGATG CGGCGCTGAC CGTGCTCGAC AGCCATGCCG GCGCGGGCCT GTACCGGCTT GACGGGGACT ATGCCCGCAC CAGTGGCGAG GCCGCAGACG GCGTGGTGCG CCTGTTTGCT GCGCCGGGCA GCGCGCTGGC CCCGGCCCTG CAAGCCTATG TGGACATGGT CGGCGCCTTC AACCAGGGCC GCCGGTTGCG GGTCTATCCC GGCTCGCCCT GCATCACGCA GCGGCTGCTG CGCGAAAGTG ACAAGCTCAA GCTATTCGAG TGGCACCCGA CCGACCTGCG GGCCTTGGCC GGCCATGTGG CCCAGTTGCA AGCGGGCCGC CAAGTGGCCG TATTCCACGA GGACGGTTTT CAGGGCATCC GGAAATTTCT ACCACCGCCC CAGCGCCGCG CTTTGCTGCT GTGCGATCCA AGCTATGAAA TCAAAAGCGA CTATGGCAAG GTGCTGGACT TGGCCACGGA CTCGCTCAAG CGCTTTGCCA CCGGCTGCTA CATGTTCTGG TACCCCATCA TCGGGCGCCC CGAAGCGCAT GAACTGCCCC GGCGCCTGAA AACGTTGGCC AGCAAAGCCG GCAAGAGCTG GCTGCATGCC ACGCTGACCG TCAAATCGGG CCAACGCACG GCAGCCGGTA GCCTCAAGCG CCCCGGCCTG CCAGCCAGCG GCATGTTTCT GATCAACCCG CCGTTCACGC TGAAGGCGGC GCTGACCCCC GCGCTGCCGC AGATGGTGCA GTTGCTGGCG CAGGACAGAC ACGCCACGCA CACGCTCGAA TCAGCGGGGT GA
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Protein sequence | MFSYRHAFHA GNHADVFKHT VLIATLQYLT DKDAALTVLD SHAGAGLYRL DGDYARTSGE AADGVVRLFA APGSALAPAL QAYVDMVGAF NQGRRLRVYP GSPCITQRLL RESDKLKLFE WHPTDLRALA GHVAQLQAGR QVAVFHEDGF QGIRKFLPPP QRRALLLCDP SYEIKSDYGK VLDLATDSLK RFATGCYMFW YPIIGRPEAH ELPRRLKTLA SKAGKSWLHA TLTVKSGQRT AAGSLKRPGL PASGMFLINP PFTLKAALTP ALPQMVQLLA QDRHATHTLE SAG
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