Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1778 |
Symbol | |
ID | 4692155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1985990 |
End bp | 1986835 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639849544 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_996550 |
Protein GI | 121608743 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.141472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACC GCATCACCGC CTCCTTGCCC TCACTGGCCC CTGCCGAACA GCGCGTGGCC AGACTGGTAC TGACCGACCC CCACGCCTTT GCCCGGCAGC CGATACGCGA GCTGGCCGAG CGTGCGCAGG TGAGCAAACC GACCGTGGTG CGCTTTTGCC GCAGCATGGG CTATGGCGGG CTGGCCGATT TCAAGCTCAA GCTCGCCGGC AGCGTGAGCG AAGGCGTACC CTTCGTCCAC CGCAGCGTGG ATGCCGACGA CAAAACCGGC GACGTGCTCG TGAAGGTGGT GGACAACGCC GTGGCGGCCT TGTTGCATTA CCGCAACGCG GCCAGCACGG CGGCCGTCGA ACGTGCCGTC GAGGCCATTG CCGCCACCTG GAAGACCGGC AAGCGTATCG AGTTTTACGG CGTGGGCAAC TCGGGCATCG TGGCGCAGGA TGCGCAGCAC AAATTTTTCC GCCTGGGGAT CACGTCGATC GCCAGCAGCG ACGGTCATAT CCAAGTGATG AGCGCCACAC TGCTCGGGCC GGGCGACTGC GCGGTCATCA TCTCCAACTC GGGCCGCACG CGCGACCTGA TGGATGCCGC CGAAATTGCC CGTAAAAATG GCGCCACCAC CATTGTCATC ACGGCCAGCG GCTCTCCCTT GGCCAGCAGT TGCCAGATTC ACTTGGCGGC CGACCACCCG GAAGCATATG ACCGCTACAG TCCGATGGTG TCGCGGCTGC TGCACCTGCT GATCATCGAC GTGCTGGCCA CCTGCGTGGC CTTGCGCATC GGTAGTTCGT TGCCGCCGAT TTTGCAGCGG ATGAAGGAGA ATTTGCGGGC CAAGAGATAC ACCTGA
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Protein sequence | MLDRITASLP SLAPAEQRVA RLVLTDPHAF ARQPIRELAE RAQVSKPTVV RFCRSMGYGG LADFKLKLAG SVSEGVPFVH RSVDADDKTG DVLVKVVDNA VAALLHYRNA ASTAAVERAV EAIAATWKTG KRIEFYGVGN SGIVAQDAQH KFFRLGITSI ASSDGHIQVM SATLLGPGDC AVIISNSGRT RDLMDAAEIA RKNGATTIVI TASGSPLASS CQIHLAADHP EAYDRYSPMV SRLLHLLIID VLATCVALRI GSSLPPILQR MKENLRAKRY T
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