Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1719 |
Symbol | |
ID | 4693002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1916336 |
End bp | 1917682 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639849480 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_996492 |
Protein GI | 121608685 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.189633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAC GGCTGCGCCG ATCTGGAATT GGCGCAGCGC CCAGCCCTTG CACCACAGCG GACGCCATGT CGAGCACACC TGCACAAGAC ACCCCGGTAG CTGCATCCCC TGCGCCCGAA CCGGTGGACG AGAACCTGGC CATCATCGCC CGCCAGGCCA TCGTGAACGA AAACCGCGAG GTCTATGGCT ATGAGCTGTT CGACCGGTCG ACCGCCTCGG ACTCGCGCAC GGCCGCCAGC GATGCCGCCC TGCTGTTCAA TGCCCTGTCT TACGCGGGCG CCGAAATTCT GGTCGGCAAG AAAACCGTCT TCATCAACTG CACCCATGAC AGCCTCTCGG GCGCCCATCT GGAGTTGATT CATCCCGACA AGGTGGTGCT GGAGGTTCCC CCCCTGCCCT ATAGCACCAC GCCAGAAGAC ATCCAAGCCC GCATCCCGAC GCTGCATGCG TTGCGCGAGC GCGGCTTTCG CCTGGCGTTC GACCAGCAGG TCTTGCGCCG CGCCTATACC CAGTGGCTGC CATTGGCGTC TTTCATCAAG CTGGACATGC AGGCGATCAA GCCCGAGTTC GCCGGGCCTT TGGTCCAATT CACCACACAG CACAGCCAGG CCACACCGAT CGCCGAGAAA GTCGAAACCG CCGCGCAGTA CGAGCTCATG CGCTCTCTGG GCGTCAAGCT GTACCAGGGC TACTGGTTCG CCAGCCCGTC GCTGGTCAAG GCCAGCACGA TCCGCCCTAC GCAGGCGGCC ATCATCGAGC TGATCAACCT GGTGCGCAGA CAGGCCAGCA CGGGCGCGAT CGAGAACCTG CTCAAGAAAG ACCCGACCTT GTCTTTCAAC CTGCTGCGCT TCATCAACTC CTCGGGCTTT GGCCTGTCAT GCGAGATCAC CTCGTTTCGC CATGCCGTCA TGATCCTGGG CCTGCAAAGG CTGTTCCGCT GGGCGGCGCT ACTGATGACT ACCTCGCGCG CCGGCGGCGC GCCGCCCGCC GTGGGCCAGA CCGCCGTGGT GCGCGGCCGC CTGATGGAGT TGCTGGCCGC CGAGTTGCTG CCGCCCGAAG AAGTCGACAA CGCCTTCGTG GTCGGCGTGT TCTCGCTGCT CGACACCATG CTGGGTGTGC CGATGGACAA AGCCCTGGAC TCCGTGGCCC TGCCCAAGTC CGTGGTCGAT GCGCTGCTGC ACGGCAGCGG CATTTTCGCC CCGTTCCTGG CGCTGACCAT GGCCTGCGAA AGCGGTGACG AAGTGAGCTT TGCCCGATCC GCGAACGCGC TGCAACTGTC CAACCGCCAG GTGAACTGGG CCCATTTGCA GGCCCTGACA TGGGCCGAGG GCCTGAGCGC AGGGTAA
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Protein sequence | MATRLRRSGI GAAPSPCTTA DAMSSTPAQD TPVAASPAPE PVDENLAIIA RQAIVNENRE VYGYELFDRS TASDSRTAAS DAALLFNALS YAGAEILVGK KTVFINCTHD SLSGAHLELI HPDKVVLEVP PLPYSTTPED IQARIPTLHA LRERGFRLAF DQQVLRRAYT QWLPLASFIK LDMQAIKPEF AGPLVQFTTQ HSQATPIAEK VETAAQYELM RSLGVKLYQG YWFASPSLVK ASTIRPTQAA IIELINLVRR QASTGAIENL LKKDPTLSFN LLRFINSSGF GLSCEITSFR HAVMILGLQR LFRWAALLMT TSRAGGAPPA VGQTAVVRGR LMELLAAELL PPEEVDNAFV VGVFSLLDTM LGVPMDKALD SVALPKSVVD ALLHGSGIFA PFLALTMACE SGDEVSFARS ANALQLSNRQ VNWAHLQALT WAEGLSAG
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