| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1716 |
|---|
| Symbol | |
|---|
| ID | 4695215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1914059 |
|---|
| End bp | 1914970 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639849477 |
|---|
| Product | tyrosine recombinase XerD |
|---|
| Protein accession | YP_996489 |
|---|
| Protein GI | 121608682 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.500655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC CCGACGCCAT CGATGCTTTC CTGGACGCCC TTTGGCTCGA GGACGGGCTG
GCGCGCAACA CGCTGGCCGC ATACCGGAGC GACCTGACGC GGTATGCGCA GTGGCTGCAC
GCGCAGCAGC CGGCCGTGGC GCTCGACGAC ACGGCAGAGC ACCATCTGCA GGCGTACTTT
GCGGCGCGGC ATGCGCAAAC CCGCGCCACA TCGGCCAACC GGCGCCTGAC GGTGCTGCGG
CGCTACTTTC ATTGGGCGCT GCGCGAGCGG CGCATCAGCG CCGATCCGAC CGCGCGCCTG
GCGGCCGCGC GCGTGCCGCT GCGCGTGCCC AAGACCATGA CCGAGACCCA GGTCGAGGCC
CTGTTGCAGG CCCCCGATCC GGGCACGCCG CTGGGCCTGC GCGACCGCGC GATGCTGGAA
CTGATGTATG CCAGCGGCCT GCGGGTGACC GAACTGGTGG GGTTGAAAAC CTTCCATCTG
GCGCTCGATG AAAACCTGCT GCGCGTCACC GGCAAGGGCG GCAAGGAGCG CCTGCTGCCG
TTTGGTGTCG AGGCCGGCCA ATGGCTGGAG CGCTACCTGC AACAGGCGCG CGGCGTGATC
CTGGGCGGCC AGCGCACGGA CGACCTGTTC GTGACCCGGC GCGGCTGCGG CATGACGCGC
GTCATGTTCT GGATCATCGT CAAGCAATGG GCCCGGGTGG CGGGCATCAC GGTCCCGCTG
TCGCCGCATA CGCTGCGCCA TGCGTTTGCC ACCCACCTGC TCAACCATGG CGCCGATCTG
CGCGTGGTAC AACTGTTGCT AGGTCATGCC GACATCTCAA CCACCACCAT CTACACCCAT
GTGGCACGCC AGCGGCTCAA GCAACTGCAT GATGAGCACC ATCCGCGCAG CCGTGCACCG
GCCGGTAAAT GA
|
|---|
| Protein sequence | MPDPDAIDAF LDALWLEDGL ARNTLAAYRS DLTRYAQWLH AQQPAVALDD TAEHHLQAYF
AARHAQTRAT SANRRLTVLR RYFHWALRER RISADPTARL AAARVPLRVP KTMTETQVEA
LLQAPDPGTP LGLRDRAMLE LMYASGLRVT ELVGLKTFHL ALDENLLRVT GKGGKERLLP
FGVEAGQWLE RYLQQARGVI LGGQRTDDLF VTRRGCGMTR VMFWIIVKQW ARVAGITVPL
SPHTLRHAFA THLLNHGADL RVVQLLLGHA DISTTTIYTH VARQRLKQLH DEHHPRSRAP
AGK
|
|---|
| |