Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1598 |
Symbol | |
ID | 4690590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1782075 |
End bp | 1783835 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639849363 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_996375 |
Protein GI | 121608568 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.26779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA AACTCGAAAG ACGGACCGTC GTGATCGTCG GTGGCGGCCT GACTGCCGGG CTGATGGCAC GCCAATTGAC GGCGCAGGCC ATCGATGTTC TGGTGCTCGA ACGCGGTGGC GACCACACCC ATGGCGCAGC AGCCCGGCTG CCGAGCCAGC GCGACGAACT GCGCTGGGGC GTGCGCCAGG GCCTGATGCA GAAATGGAAT GTGCAGACCT ACAGCTTGCG CCATTCGCGC AGCGACGCTT CGCTGCCCGT GCGCTGGATG GAAGCCTTTC TGCCCGGCGA GGGTATGGGC GGCGCGGCGA GCCATTGGAA CGGACACACA TGGCGCTGGG CCGGGTACGA CCCGACCCTG CGCACGCGCT ATGCGCAGCG CTACGGCAGC AAGGCGATTG CGTCGACCAT GCCGCTGCAG GACTGGGGCG TCACCTACGA GGAGATGGAG CCTTACCACG ATTTGTTTGA AAAGCTGTTC GGCTTGTCGG GCACGGCAGG TAACGTGCAC GGCGAAACGC GGCCCGGGGG CAATCCCTTC GAGGCGCCGC GCCGGGGTGA GTACCCGCAA AAAGCGCTGG AAATTACCGA GGCAGGATTG ATTTTCAAGC AGGCCGCCGA AAAGATGGGC TATCACCCGT TCCCGATACC GGCAGCCAAT TCCTCCGGGG TGTACACCAA CCCCGACGGT CAGAAACTCG GCCAGTGCCA GTATTGCGGC CATTGCGAAC GGTTCATCTG CGAAGCGCAG GCCAAGGCGT CTGCGGACGT TTTGCTGTAC CCGATGCTCA GGCAGCGCAA GGGATTTGAG TTGCGCCTGC ACAGCCATGT GCTGGGCGTG AATTACGAGC GCCAGGCCCA GCGCGTGACC GGCGTGCGCT ATGTCGATGG GCGCAGCGGC AAAGAATACG AGCAGCCGGC CGATGTCGTC GTGCTCGGCG CGTTCACGAT GACCAACAAC AAGTTGCTGA TGCTCGACGA GATCGGCGTT GCGTATGATC CGCTCACCGG CAAAGGCGTG GTCGGCAGGA ACTTCTGCTA CCAGACCAAT TCAGGGGTCG GCATCTTCAT GAAAGACCGC TGGATCAATC CTTTCCTGGC CAGCGGCAGC ACCGGCATGG TGATCGACGA CTTCAACAAC GACAACTTCG ACCACACCGG ACTCGGCTTC CTGGGCGGCG GCATGATCAG CGCCAGCGTA TTCAACGGCC GCCCCATTAC CGCGCGCCGT CTGCCGCCCG GCACTGCGCG CTGGGGCACC CGGTGGAAGC AGGCCAATGC CGATTGGTAT GCGCACTCGT TCGGTTTGTC GATTCAGGGC AGTTGCTACC CCGACACCGG GAACTTCCTC GATCTCGATC CGGTATACAA AGACGCCTAC GGCCAGCCGC TGGTGCGCAT GACTTTCGAC TGGCGCGACA ACGAGATGAA GATGTCGGCC TACGTGACGA AGAAGATGGA CGAAATCGCC AAGTCCATCG GGGCCGACAT CGTCTCCCCG GCAATACCGC GCAAGAGCCC GTTCGACACG CGCATTTATC AAAGCACGCA TGTCACCGGC GGCACGCCGA TGGGCACGGA CCCGGCAACC AGCGTCGTCA CGCCGCACCT GCAGCATTGG GATGCGCAAA ATCTGTTCGT GGTCGGCGCT TCGGTGTTTC AGCACAACTC CGGCTACAAC CCGACCGGCC CGTTGGCGGC GTTGGCGCTG CGGCTGGGCG ATGATCTGGT GCGCTACGTT CAGCGTCCGC GCATGTTGTG A
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Protein sequence | MIKKLERRTV VIVGGGLTAG LMARQLTAQA IDVLVLERGG DHTHGAAARL PSQRDELRWG VRQGLMQKWN VQTYSLRHSR SDASLPVRWM EAFLPGEGMG GAASHWNGHT WRWAGYDPTL RTRYAQRYGS KAIASTMPLQ DWGVTYEEME PYHDLFEKLF GLSGTAGNVH GETRPGGNPF EAPRRGEYPQ KALEITEAGL IFKQAAEKMG YHPFPIPAAN SSGVYTNPDG QKLGQCQYCG HCERFICEAQ AKASADVLLY PMLRQRKGFE LRLHSHVLGV NYERQAQRVT GVRYVDGRSG KEYEQPADVV VLGAFTMTNN KLLMLDEIGV AYDPLTGKGV VGRNFCYQTN SGVGIFMKDR WINPFLASGS TGMVIDDFNN DNFDHTGLGF LGGGMISASV FNGRPITARR LPPGTARWGT RWKQANADWY AHSFGLSIQG SCYPDTGNFL DLDPVYKDAY GQPLVRMTFD WRDNEMKMSA YVTKKMDEIA KSIGADIVSP AIPRKSPFDT RIYQSTHVTG GTPMGTDPAT SVVTPHLQHW DAQNLFVVGA SVFQHNSGYN PTGPLAALAL RLGDDLVRYV QRPRML
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