| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1568 |
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| Symbol | |
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| ID | 4694933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1754362 |
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| End bp | 1757310 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639849332 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_996345 |
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| Protein GI | 121608538 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0336191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000249551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCAAAC CCCTGAAAAT CAGCGAAGCG GGCACCGTGC AGTTCCCGAT GGTGCGCCAC
GCGGCGGAAA TCGGCTGGAC GACCATCACG CCCGACGATG CCCGCGCCAA GCGCGGCGGC
GATGCGGGCA CGTTCTTCCG CGACGTGCTG GAAGCCAAGC TCGCGGCCTT CAACCCGTGG
CTGACGGCGG ATGCCATCCG CTCCATCGTG GAAACGCTGG ACGCGCTGCC GCCCGGCATC
GAAGGCAACC GCGAACTGCT GGGCTGGCTG CGCGGCGAAC GCCAGTGGTA CGACGAGGCG
GAAAAGCGCC ACCGAGCGGT GACGCTGATC GACTTCGATC ACCCGGCGGA AAACGCCTTC
CACGTCACTT GGGAATGGAA GATCAAACCG CCCGCGCGGC CCAAGGGCAA CCGCGCCGAC
GTGATGTTCG TGGTCAACGG CGTGCCGGTG GTCATCGTCG AGCACAAGAA TCCGAAGGAC
GGCGACGCCA TCGAGCGCGC TATCAAGCAA CTGCGCCGCT ACGAAATGGA AACACCGGAA
CTGCTGGCGA CTGCGCAGTT GTTCAACGTC ACCCATCTGC TCGATTACTG GTACGGCGTG
ACCTGGAACG CCACCCGCCG CGACATGGCG CGCTGGAAGC AGGCCCCGGA GGAAAGTTAC
CGCTTCGCGG TGCAGGCCTT CTTTGAGCCG ACCGAGTTCC TGCGCACCTT GCAGCACTGG
ATTCTGTTCT ACGTGCAGGA CGGCGAAACG CGCAAATCCG TGCTGCGCCA GCACCAGCGC
CGTGCCATCG ACGCCATCCT TGCACGCTGC GCCGACCCGG CCAAGACGCG CGGGCTGGTC
TGGCATACAC AGGGTTCGGG CAAGACCTTC ACCCTGCTCA CCGCCGCGCG GCAGATTCTG
GAAGACAAGG CGCGTTTCAA GAATGCCACC GTGCTGCTGG TGGTGGACCG TACCGAACTC
GAAGGCCAGT TGAAGGGCTG GGTCGAGCGC CTGCTGGGCG AGATGCAGGC GCAGGACATC
GCGGTCAAGC GCGCCAGCAA CAAGGCCGAA CTGCAAGCCC TGCTGGACGC GGATTTTCGC
GGCCTCATCA TCTCGATGAT CCACAAGTTC GACGAGGTGA AGAAAGACAG TTGCACGCGT
GACAACGTCT ATGTGTTCAT CGACGAGGCG CACCGCTCGG TGGCGAAAGA CTTGGGCACC
TACCTGATGG CGGCATTGCC CAAGTCCACC ATCATCGGCT TTACTGGCAC GCCGATTTCG
CGCAGCGCGC AGGGCGAAGG CACGTTCAAG ATTTTCGGCA CGCAGGACGA ACACGGCTAT
CTCGACAAGT ATTCGATTGC CGAAAGCATC ACCGACGAAA CCACGCTGCC CATCAAGCAC
ATGATGGCCC CCAGCGAAAT GACCGTGCCT GCCGAACGGC TGGACAAGGA ATTCTTCGCG
CTGGCGGAAA GCGAAGGCGT CAGCGACGTG GAGGAACTCA ACAAGGTGCT CGACCGCGCC
GTGGGCCTGC GCACCTTCCT CACCGCCGAC GAGCGCATCG AGAAGGTGGC GGCTTTCGTC
GCCGAACACT TTAAGGAAAA CGTGCTACCG CTGGGCTACA AGGCGTTTGT CGTGGCGGTG
AACCGCGAAG CCTGCGCCAA GTACAAACAG GCGCTGGACA AGCTGCTGCC GCCGGAATGG
ACGGTGCCGG TCTATACGCA GAACGCGGCG GATGCGATTG ATCGCCCGCT GGTGGCGAAG
CTACAGCTTT CCGACGAGGC CGAGGAACAG GCGCGGCTGA TGTTCAAGAA GCCCGCCGAA
AATCCGAAGA TTCTGATCGT CACCGACAAG CTGCTCACCG GCTACGACGC ACCGCTGCTG
TATTGCCTCT ACCTCGACAA GCCGATGCGC GACCATGTGC TGCTGCAATC CATCGCGCGC
GTGAACCGGC CTTATGTGGA TGCCAACGGC GTGCGCAAGC GCGTCGGGCT GGTGCTGGAT
TTCGTCGGCG TGCTGCGCGA ATTGAAGAAG GCGTTGACCT TCGACTCCAG CGACGTGGGC
GGCGTGATCG AGGACTTGGA CGTGCTGTTG CAGGATTTTC TGCAACGCAT TGCGCAGGCG
AAACAGGAAT ACCTTGAGGC CGATGCGGAG GGTGCGCCGG ACGAGCGGCT GGAAAAGCTG
GTGTTCGGTC GCTTCCTGAC ACCGGAAGCG CGCAAGACCT TCTTCGAGGC GTACAAGGAA
ATCGAAGCGT TGTGGGAAAT CCTCTCGCCC ACGCCGGAAC TGCGCGACCA CATCGCCAGC
TACAAGCAGT TGAGCCAGCT TTACGCGGCG GTGCGCAACG CCTATGCGGA GAAGGTCGGC
TTCGTCGCCG ATCTGGCCTA CAAGACCCGG CGGCTGATCG AGGAAAGCGC CGAGCAGCAA
GGCTTGGGAC GGTTGACCAA GAGCGTGACA TTCGACGTGG CGACCCTGCA ATCGTTGCGC
GGCGACAAGG GTTCGGACGA AGGCAAGGTG TTCAACCTCG TGCGCGGCTT GCAGCAGGAG
ATCGACCAGG ACGCCGCCGC CGCGCCCGTG TTGCAGCCAC TGAAAGACCG GGCCGAGCGC
ATCCTGAAGG ATTTGGAGGA ACGCAAGACC ACGGGCCTGG CCGCGATGGA TCAATTGGCG
GCGCTGGCGG CGGAGAAAGA AGCCGCGATG AAGGCGGCAC GCGACAGCGG CCTGTCGGCA
CGCGCGTTCG GCGTGTTCTG GGTGCTGCGC GAGGATGCAG CGGTGAAGGC CGCAAGCCTC
GATGCAATGG CGCTGGCGAA GGACATCGAG GAACTGCTGG GCCGCTTCCC CAATGCCGCG
GTCAACCCCG ACGAACGACG GCGACTGCGC GCGGCCATCT ACAAGCCCTT GCTCGGCCTG
CCGCCAGAAG AACGCACCCG CGCCGTCGAT CTGGTGTTCA AGATGCTTCT GGTGGAGGCG
GATGAATGA
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| Protein sequence | MSKPLKISEA GTVQFPMVRH AAEIGWTTIT PDDARAKRGG DAGTFFRDVL EAKLAAFNPW
LTADAIRSIV ETLDALPPGI EGNRELLGWL RGERQWYDEA EKRHRAVTLI DFDHPAENAF
HVTWEWKIKP PARPKGNRAD VMFVVNGVPV VIVEHKNPKD GDAIERAIKQ LRRYEMETPE
LLATAQLFNV THLLDYWYGV TWNATRRDMA RWKQAPEESY RFAVQAFFEP TEFLRTLQHW
ILFYVQDGET RKSVLRQHQR RAIDAILARC ADPAKTRGLV WHTQGSGKTF TLLTAARQIL
EDKARFKNAT VLLVVDRTEL EGQLKGWVER LLGEMQAQDI AVKRASNKAE LQALLDADFR
GLIISMIHKF DEVKKDSCTR DNVYVFIDEA HRSVAKDLGT YLMAALPKST IIGFTGTPIS
RSAQGEGTFK IFGTQDEHGY LDKYSIAESI TDETTLPIKH MMAPSEMTVP AERLDKEFFA
LAESEGVSDV EELNKVLDRA VGLRTFLTAD ERIEKVAAFV AEHFKENVLP LGYKAFVVAV
NREACAKYKQ ALDKLLPPEW TVPVYTQNAA DAIDRPLVAK LQLSDEAEEQ ARLMFKKPAE
NPKILIVTDK LLTGYDAPLL YCLYLDKPMR DHVLLQSIAR VNRPYVDANG VRKRVGLVLD
FVGVLRELKK ALTFDSSDVG GVIEDLDVLL QDFLQRIAQA KQEYLEADAE GAPDERLEKL
VFGRFLTPEA RKTFFEAYKE IEALWEILSP TPELRDHIAS YKQLSQLYAA VRNAYAEKVG
FVADLAYKTR RLIEESAEQQ GLGRLTKSVT FDVATLQSLR GDKGSDEGKV FNLVRGLQQE
IDQDAAAAPV LQPLKDRAER ILKDLEERKT TGLAAMDQLA ALAAEKEAAM KAARDSGLSA
RAFGVFWVLR EDAAVKAASL DAMALAKDIE ELLGRFPNAA VNPDERRRLR AAIYKPLLGL
PPEERTRAVD LVFKMLLVEA DE
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