| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1541 |
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| Symbol | |
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| ID | 4693386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1727290 |
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| End bp | 1728285 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639849305 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_996318 |
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| Protein GI | 121608511 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.389022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0326533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC AACGAACGGC CCTTCGGACA TTCGCCGCCT GCGCGCTGGC CGCCGCCAGC
CTCGGCCTGG CGGGCATCGC CGCTGCGCAG GCCAAGCTCA AGTGGGCCCA TGTCTACGAG
ACATCGGAAC CGTTTCACAA ATACTCGGTG TGGGCCGGCA ACGAGATCAA GAGGCGCACC
AACGGGCGCT ACGAGGTGCA GGTGTTCCCG GCCTCCACGC TCGGCAAGGA AGCCGACATC
AACCAGGGCC TGACGCTCGG CACGGTCGAC ATCATCATGG CCGGCCCGAG TTTCGCGGGC
CGCCTCTACC CGCCGCTGGC GGTCTCGGCC TTTCCGTTCA TCTTTCGCGA CGCCGAGCAC
CAGATCAAGT ACGCCAGGAG CGATGTGTTC AAGGAACTGG CCAAGGGCTA CGACGACAAG
AGCGGCAACC ACATCACGGC GCTGGGCTAC TTCGGCACGC GCCATGTCAC CTCCAGCGCC
GCGCGCCCGG TGGCCCGGCC CGAGGACATG AAGGGCCTGA AGATCCGCGT GCCCGATACG
CCGGCCACGC TGATTTTTCC GCGCGCGCTG GGCGCCAACC CGACGCCGAT CGCTCTCGCC
GAGGTCTACC TGGCGCTGCA AAACAACACG GTCGATGCGC AGGAAAGCCC GCTGCCGACG
ATCGATGCGA GGAAATTCTT CGAGGTGCAA AAGAACATCT CGCTCACCGG CCACATCGTC
GAATCGCTCT TGACCATCTG CTCGGGCACG CTGTGGGCCA GGCTCTCGGA CGAGGACAAG
AAGGTCTTCG GCGCGGTGAT GCAGGAAGCC GCAGACAAGG CCGGCCACGA GGTCCTCGCC
GCCGAGGCGC GCCTGGTGCA GGAGTTCAGG AACAAGGGCA ACAACGTGAT CGCGGTCGAC
AAGAGGGCCT TCCGCGAGGC CGTGCTCAAG GCCACCAGGC CGACCGACCA TGGCTTGCGC
CAGCGGGACT ACGAGCGCAT CCTGGCCATC CAATGA
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| Protein sequence | MSSQRTALRT FAACALAAAS LGLAGIAAAQ AKLKWAHVYE TSEPFHKYSV WAGNEIKRRT
NGRYEVQVFP ASTLGKEADI NQGLTLGTVD IIMAGPSFAG RLYPPLAVSA FPFIFRDAEH
QIKYARSDVF KELAKGYDDK SGNHITALGY FGTRHVTSSA ARPVARPEDM KGLKIRVPDT
PATLIFPRAL GANPTPIALA EVYLALQNNT VDAQESPLPT IDARKFFEVQ KNISLTGHIV
ESLLTICSGT LWARLSDEDK KVFGAVMQEA ADKAGHEVLA AEARLVQEFR NKGNNVIAVD
KRAFREAVLK ATRPTDHGLR QRDYERILAI Q
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