Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1460 |
Symbol | |
ID | 4690457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1635032 |
End bp | 1636021 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639849225 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_996238 |
Protein GI | 121608431 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03637] CRISPR-associated endonuclease Cas1, YPEST subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCCA TCGTCTCCTC TGACCTGAAA ACCATCCTCC ACTCCAAGCG CGCCAACCTC TACTATCTGG AACATTGCCG TGTGCTCGTC AATGGCGGGC GGGTGGAGTA TGTGACGGAT GCGGGCAAGC GCAGTCTGTA CTGGAACATT CCCATCGCCA ACACCACCAG CATCCTGCTG GGCACGGGCA CCTCCGTCAC TCAGGCGGCC ATGCGCGAGT TGGCCAAGGC CGGGGTGCTG GTCGGGTTTG CCGGCGGTGG CGGCACGCCC TTGTTCAGTG CCAATGAGGT GGATATCGAG GTGGCGTGGT TCGCCCCGCA ATCGGAATAC CGGCCTACCG AATATCTGCA AGCCTGGGTG CGCTTCTGGT TTGATGATGC GTTGCGCCTC ATGGCGGCCA AAGCCTTGCA GACGCAGCGC TTGCAGCGGC TGCACTCGCA ATGGACGGCG CGGCCGTTGC GCGATGCCGG CTTTGTCGTC GATGCGCAGC GTCTGCACGA ACTGGTCGCG CAGTTCACCC GGCAGATTGC CATGGCGCCC GATGTCACCG CCTTGCTCAC CGACGAGGCG CGGCTGACCA AGGCCCTTTT CAAACTGGCC GTCGAGGCCA CCGGCTACGG CGAGTTCACC CGCACCAAGC GCGGCGCCGG CACAGACCCC GCCAACCGTT TTCTCGACCA TGGCAATTAC CTGGCTTATG GGCTGGGGGC CACGGCCACC TGGGTGTTGG GGCTGCCGCA CGGCTTGGCG GTGCTGCATG GAAAAACGCG CCGCGGCGGC CTCGTCTTCG ATGCCGCTGA TTTGGTCAAG GATGCTGCCA TCCTGCCGCA GTCCTTTCTT TCTGCCATGC GGGGCGATGA CGAACGGCAG TTTCGACAGC ACTGCATCCA GACGCTTGCC AGCAGCGAGT CGCTGGACTT CATGATCGAC ATGCTCAAGA CCATTGCGCT GGATACCGCG CAGCACACCG CGCAAGGTGC GACGCAATGA
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Protein sequence | MDPIVSSDLK TILHSKRANL YYLEHCRVLV NGGRVEYVTD AGKRSLYWNI PIANTTSILL GTGTSVTQAA MRELAKAGVL VGFAGGGGTP LFSANEVDIE VAWFAPQSEY RPTEYLQAWV RFWFDDALRL MAAKALQTQR LQRLHSQWTA RPLRDAGFVV DAQRLHELVA QFTRQIAMAP DVTALLTDEA RLTKALFKLA VEATGYGEFT RTKRGAGTDP ANRFLDHGNY LAYGLGATAT WVLGLPHGLA VLHGKTRRGG LVFDAADLVK DAAILPQSFL SAMRGDDERQ FRQHCIQTLA SSESLDFMID MLKTIALDTA QHTAQGATQ
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