Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1391 |
Symbol | |
ID | 4694839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1550967 |
End bp | 1551974 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639849159 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_996173 |
Protein GI | 121608366 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACGA TGAAGTCATC TGCCGCTCCA CCAACGATGC AGCAAGTCGC CCGTGCGGCT GGCGTTGCGC GTTCGACGGT TTCCAGGGCT TTCACCAAGC CCGGCATGCT CAGCACCGAA ACAGTCGCGC AAATCAAGAG CGTGGCGGCT TCCTTGGGTT ACGTTCCGAA CCAAGTCGCA CGGGCGTTAT CGACGGGTCG GCATGGCAAT GTCGCGCTGA TCGTCCCCGA CGTGGCCAAC CCTTTTTTCC CCCCGTTGAT CCGGGCCGTC GAAGCGGCGG CCGATGCGGC CGGGATGTGC ATCTTTCTCG GTGACTCCGA TGAGGATCCG GCAAGAGAGG CTCGGCTGGT CGGCAAGCTG TCGGCACAGG TCGACGGATT GATCCTGGCC TCTTGCCGGT TGGCAGAAGG CGCGATACAG GCCTTGAGCG GACGATTGCC GATCGTGCTG ATCAACCGTG ATGTCGCGGG CATGGACCGT GTGCTGATCG ATAGCGCGCC GGGTGTTGCC GCTGCAGTGC GGCATCTGCA CGAACTCGGA CACCGGTGTG TCGCCTATCT CGCTGGCCCT GCCTCCTCAT GGTCGAACGA GCGGCGCCGG ATTGCCGTGC TGGACACAGC GCAGGAATCG GGTTTGGAGG TCATACAGAT CGCCCCCCGA CGCCCTTCTT ACGAAGGCGG GATGGCCGCC GCAACCATTG TCCGATCCAC CCGCGCGACC GCAGTCATTG CTTTCGATGA TCTGGTGGCG CAGGGGCTGC TGGCTGGCAT GGCCCGGATG GGTGTCCATG CGCCCGCCGG CATCAGCGTC GTCGGATGCG ACGATGTGCT GGCCACCCGC ACCTATCCTG CACTGACCAC CATTGCCTCC CGTCCGGAAC TGGCCGGGCG CATGGCCATG GAAGTCTTGC TGGAGCAACT GGCCGCAGGC AAATCGAGCG GCGCGGCCCA CATGCTGAAT ACCGAGTTGA TCATTCGCGC GACGACCGGA CTGCCCCTGT TGCGCTAG
|
Protein sequence | MDTMKSSAAP PTMQQVARAA GVARSTVSRA FTKPGMLSTE TVAQIKSVAA SLGYVPNQVA RALSTGRHGN VALIVPDVAN PFFPPLIRAV EAAADAAGMC IFLGDSDEDP AREARLVGKL SAQVDGLILA SCRLAEGAIQ ALSGRLPIVL INRDVAGMDR VLIDSAPGVA AAVRHLHELG HRCVAYLAGP ASSWSNERRR IAVLDTAQES GLEVIQIAPR RPSYEGGMAA ATIVRSTRAT AVIAFDDLVA QGLLAGMARM GVHAPAGISV VGCDDVLATR TYPALTTIAS RPELAGRMAM EVLLEQLAAG KSSGAAHMLN TELIIRATTG LPLLR
|
| |