Gene Veis_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1297 
Symbol 
ID4690782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1434824 
End bp1435852 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID639849069 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_996083 
Protein GI121608276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG CCGCCGCCCA TCCGGCCGGC CCGGCCAGTT CGGCCCTGGT GCAGGCGCAT 
GACCTGGCCA TGACCTTCGA CGTATCCGCC CCCTGGCTCA ACCGTGTGCT CGAACGCAAG
CCGCGCGCGC TGTTGCACGC GGTCGACGGC GTGGACTTTA CGATCGAAAA AGGCCAGACG
CTGGCCCTGG TGGGCGAATC CGGCTGTGGC AAGAGCACCG TGGCCCGCCT GCTGGTGGGC
CTGTACCAGC CCACGCGCGG GAGTTTCCGG TTCGACAACC AGGACGCACA TGCGGCTTTC
AAAGGCCCCG AGGCGCGCGC GCTGCGGCGC CGCATACAGA TGATCTTCCA GGACCCCTAT
GCCAGCCTGA ACCCGCGCTG GCTGGTGCAA GACATCGTCG GCGAGCCGCT GCGCGAGCAT
GGCCTGATCA CCGACCGAGG CGCGCTCGGG CACCGCGTGG GCGATCTGCT GCGCTCGGTG
GGCCTGTCGC CGCTGGACAT GGCGAAGTAC CCGCACCAGT TTTCCGGCGG CCAGCGCCAG
CGCATCTCGA TTGCCCGCGC GCTGGCCACC GAGCCTGAGT TCCTGGTGTG CGATGAGCCT
ACCTCGGCGC TCGATGTGTC GGTGCAGGCG CAGGTGCTCA ACATCATGAA AGACTTGCAG
CGCCAGCGGC AACTGACCTA TCTGTTCATC AGCCACAACC TGGCGGTGGT GCGCCATGTG
AGCGACCAGG TCGGCGTGAT GTACCTGGGC CGGCTGGTGG AACTGGCCGA CAAGCATGCG
CTGTTCGATA CGCCGCGCCA CCCCTACACG CGCATGCTGC TCGACGCCAT CCCCAAGATG
CACGACACCG GCAAGGCGCG CACGCCGGTG CAGGGCGAGG TGCCCAATCC GCTGAGCCCG
CCGTCCGGCT GCGCCTTTCA TCCGCGCTGC CCACATGCGG ATCAGCGCTG CCGGTCGGAG
CGGCCGCAAC TCCAGAGCCT GGACGGCATA CGGATTGCTT GCCATGCGGT GGCGAGCGGA
CGGCTCTGA
 
Protein sequence
MSSAAAHPAG PASSALVQAH DLAMTFDVSA PWLNRVLERK PRALLHAVDG VDFTIEKGQT 
LALVGESGCG KSTVARLLVG LYQPTRGSFR FDNQDAHAAF KGPEARALRR RIQMIFQDPY
ASLNPRWLVQ DIVGEPLREH GLITDRGALG HRVGDLLRSV GLSPLDMAKY PHQFSGGQRQ
RISIARALAT EPEFLVCDEP TSALDVSVQA QVLNIMKDLQ RQRQLTYLFI SHNLAVVRHV
SDQVGVMYLG RLVELADKHA LFDTPRHPYT RMLLDAIPKM HDTGKARTPV QGEVPNPLSP
PSGCAFHPRC PHADQRCRSE RPQLQSLDGI RIACHAVASG RL