| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1286 |
|---|
| Symbol | |
|---|
| ID | 4693203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1422101 |
|---|
| End bp | 1423513 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639849058 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_996072 |
|---|
| Protein GI | 121608265 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
|---|
| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATG GCAAGAAAAT CCGAGCACCA CTTCATCGAT GGAAGAGCAC CATGAACCAG
CCCACCCGCT TCGTTCTTGA CGAACCCAGG CTGCCCCGCG TTTGGTACAA CCTTGCTGCG
GACTTGCCGC AGCCTGTGCC TGCGATGCTT CATCCCGGCA CACGCCAGCC TATACAGGCC
AGCGACCTCG CACCGCTGTT TCCGCCTGCG ATCATCGGGC AGGAGTTGTC GGTCGAGCGG
GAAATTCCGA TTCCCGACGC GGTGCGTGAC GTGTATCGCC TGTGGCGCCC GTCGCCGCTC
ATTCGCGCGC ACCGGCTGGA GCAGGCGCTC GATACGCCGG CGCGCATCTA CTACAAGAAT
GAAGGCGTAT CGCCGTCCGG GTCGCACAAG CCAAATTCCG CCGTGCCGCA AGCCTGGTAC
AACAAGCAGG CCGGCATCAA ACGGTTGACC ACGGAAACAG GCGCAGGCCA ATGGGGGGCG
TCTCTCGCTT TCGCCGGGCA GCTTTTCGGA CTGGACGTTA CCGTCTTTCA GGTGCGCATC
TCATACGATC AAAAACCGTA CCGCAGAGCG CTGATGGAAA CCTACGGCGC GCGCTGCCTG
GCGTCGCCAT CGACAGAAAC CGGGTTTGGC CGCTCCGTAC TGTCCAGAGC TCCCGATCAC
CTCGGCTCGC TGGGTATCGC GATCTCCGAG GCCGTCGAGG CCGCCGTGGC AACACCCGAC
ACGCGCTATG CGCTCGGCTC GGTCTTGAAC CATGTGCTGC TTCATCAAAC GATCGTTGGG
CAGGAGGCGC TGATGCAAAT GGAAATGGCG GGCGACGACC CCGACGTGAT CGTCGCGTGC
ACCGGCGGCG GGTCCAATTT CGCCGGTCTG GTGTTTCCGT TTCTTGGCTT GCAATTGCGC
GGCGGGCGGG CGCGCCGCTA CGTTGCGGCG GAACCCATGG CGTGTCCGTC GCTGACACGC
GGGCGCTATG CGTATGACTT CGGCGATACA GCCGGCATCA CGCCGCTGGC GAAGATGCAC
ACGCTGGGAT CGGGCTTTAC GCCGCCGGGA CTTCATGCGG GCGGGCTGCG CTATCACGGC
ATGGCGCCGT TGGTGTCGCA TCTGCGCGAG TTGGGCCTCA TCGAAGCAAT GGCCTACCAT
CAAACCGAAT GCTTCGGCGC TGGCCGGCTG TTTGCGCGCT GCGAAGGCAT CATCCCGGCA
CCGGAAGCCA ACCATGCGAT TGCTTGCACC ATTCAGGAAG CGTTGCGCTG CAAGCGCGAG
GGGCGGGCGG AGACCATTTT GTTCAATCTG TCGGGACACG GCCACTTCGA CATGAGCGCG
TATCAGGATT TCAACGCGCA GCAATTGACC GACAAGACTT ACGATGAAAC CGAACTGGCG
ACGGCGCTCG CCGGCCTGCC ATCCGTTTCC TGA
|
|---|
| Protein sequence | MIDGKKIRAP LHRWKSTMNQ PTRFVLDEPR LPRVWYNLAA DLPQPVPAML HPGTRQPIQA
SDLAPLFPPA IIGQELSVER EIPIPDAVRD VYRLWRPSPL IRAHRLEQAL DTPARIYYKN
EGVSPSGSHK PNSAVPQAWY NKQAGIKRLT TETGAGQWGA SLAFAGQLFG LDVTVFQVRI
SYDQKPYRRA LMETYGARCL ASPSTETGFG RSVLSRAPDH LGSLGIAISE AVEAAVATPD
TRYALGSVLN HVLLHQTIVG QEALMQMEMA GDDPDVIVAC TGGGSNFAGL VFPFLGLQLR
GGRARRYVAA EPMACPSLTR GRYAYDFGDT AGITPLAKMH TLGSGFTPPG LHAGGLRYHG
MAPLVSHLRE LGLIEAMAYH QTECFGAGRL FARCEGIIPA PEANHAIACT IQEALRCKRE
GRAETILFNL SGHGHFDMSA YQDFNAQQLT DKTYDETELA TALAGLPSVS
|
|---|
| |