Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1162 |
Symbol | |
ID | 4691932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1285526 |
End bp | 1286908 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639848938 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_995952 |
Protein GI | 121608145 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCTG TTTCGCCTGA TCTTCTGCGC CGCTTCGACG TGCCAGGGCC CCGCTACACC TCCTATCCGA CGGCCGACCG TTTTGTCGAA GCCTTCGGCC AGGAGGACTA TGTGCTGGCG CTCGAGCAAC GCCGCTCGTG CGCGATGGCC AAGGCGCAGC CGTTGTCCTT GTATGTGCAC ATCCCGTTTT GCGAGTCGCT GTGCTACTAC TGTGCCTGCA ACAAGATCAT CACCCGGCAC CCGGAGCGCG CCACCGTCTA TCTGCGCTAC CTGGCGCGCG AGATCGCATT GCAGACCACG CACTGCGGCG TCGGTCAGGT GGTCAGTCAA TTGCATCTGG GCGGCGGCAC GCCCACCTTC CTGGCCGATG CCGGCCTGCG CGAACTCATG GCCATGCTCC AGCGCAGCTT TGCCTTGGCG CCGGGCGGCG AGTATTCGAT CGAAGTCGAT CCCCGCACCG TCGACGCCGA CCGGCTGGCA TGCCTGGCCG AGTTGGGCTT CAACCGGCTG AGTCTGGGTG TGCAGGATTT CGACGCCGGG GTGCAAAAGG CGGTGCACCG CGCGCAACCT GCCGAGCAGG TTTTTGCGCT GCTCCAGGCT GCGCGCGCGC AGGGCTTCGA CTCGGTGAAT ATCGATCTGA TCTATGGCCT GCCGCGCCAG ACGCCCGAGT CCTTCGAGCG CACATTGGCG CAGACGGTGC AGTTGCGGCC TGAGCGCATC GCGCTGTATG CCTATGCGCA CCTGCCCGAG CGCTTCAAGC CCCAGCGCCG CATCGTGTCG GCCGAGTTGC CGGCAGCAGC GGCCAAGCTG GAGATGCTCG CGCGCGCGCT CGACGCATTC ATCGCCGCAG GCTATGTCTA TGTCGGCATG GACCACTTCG CGCTGCCTTC AGACGCGCTG GCCGTGGCCA AGCGGCAGGG GCGGCTGCAT CGCAATTTCC AGGGCTACAG CACGCAGCCG GACTGCGACC TGATCGGCCT GGGGGTTTCG GCCATTGGCC GCGTGGGCGC CAGCTACAGC CAGAACGCCA AGACGCTGGA CGAGTATTAC GACTTTCTGG ACCAAGGGCG TCTGCCGGTG GTGCGGGGCC TGGCGCTGAC GCGCGACGAC CTGGTGCGGC GTGCGGCGAT CATGGCCATC ATGTGCCAGG GCGAGTTGCT GTTCGAGCCG ATGGAGCAGG CTTGGCTGAT CGATTTTCGG CAGTATTTTG CGGTCGAACT CGCGCAGCTC GAAAACCTGG CCGAGCAGGG CCTGGTGCGG ATCGGGCCGG AGAGTGTGAC CGTGAGCGCC ACGGGCTGGT TCTTCGTGCG CGGCATTGCG ATGGTTTTCG ACCGCTACCT GCAAGCCGAT CGCAACCGCG CCCGGTTTTC GCGCATCATC TAA
|
Protein sequence | MPAVSPDLLR RFDVPGPRYT SYPTADRFVE AFGQEDYVLA LEQRRSCAMA KAQPLSLYVH IPFCESLCYY CACNKIITRH PERATVYLRY LAREIALQTT HCGVGQVVSQ LHLGGGTPTF LADAGLRELM AMLQRSFALA PGGEYSIEVD PRTVDADRLA CLAELGFNRL SLGVQDFDAG VQKAVHRAQP AEQVFALLQA ARAQGFDSVN IDLIYGLPRQ TPESFERTLA QTVQLRPERI ALYAYAHLPE RFKPQRRIVS AELPAAAAKL EMLARALDAF IAAGYVYVGM DHFALPSDAL AVAKRQGRLH RNFQGYSTQP DCDLIGLGVS AIGRVGASYS QNAKTLDEYY DFLDQGRLPV VRGLALTRDD LVRRAAIMAI MCQGELLFEP MEQAWLIDFR QYFAVELAQL ENLAEQGLVR IGPESVTVSA TGWFFVRGIA MVFDRYLQAD RNRARFSRII
|
| |