| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1109 |
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| Symbol | |
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| ID | 4693263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1232666 |
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| End bp | 1233682 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639848887 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_995901 |
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| Protein GI | 121608094 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.141218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCACT TGCATCGTCA TCGCTCGCGC CGTCATTTCC TGCGCGCCTG CGCCGCCACT
GCGGCCATCG CCCATCCCGT CATCGGCATG GCCCAGGGGC TGGCCGCGCA AACCACCATC
CACTATGGCG GCTCGGCCTG GCTGGGCCAC TATCCGGCTT ATCTGGCGCT GAAAAGCGGC
ACGCTCCCGG CGGCGTCGAT CGATCTGCGA TGGCAATCCT TCGGCACCTC CTCGGCGCGC
ATGAGCGCCG TCCTGTCCGG TGGGATCGAC ATCGCCTGCA CCGGCATCGT CTCGGCACTG
GCGCTGATGG CGCGCGGTTC CAGGCACTTT GCCATCATCG CCGTGCCGGA GGACTTCGGC
CGCGTCGAGG GCTTGTTTGT CCGCTCCGAT GTCAGCGCCA TCGAGCACCT GAGGGGCAAG
AAAATCGGCG TGACCTTCGC CTCCAGCGCG CACCTGCTGG TGCTCGACCT GCTGGCTGGC
GCGGGCCTGG GGCCTGCCGA TGTGACGGTG CTGAATGTGC CGGCCCCGGA GTTGCCTGCG
GCGATGGCGG CCGGCCAGAT CGATGCGGCG GCGGCATGGA CGCCGCAATT TCACCGGATT
CGCGCGCTGC CGGGCATCAA GCTGCTCGCC GATGACACGG CGTTCTCGCT GTTCAAGAGC
CACAAGGTCA CCCCGGGCCC GGATGTTCTG GTGGTGCGCC AGGCGTTTGC CGACAAGAAT
CCGCTGGCCG TGCGCGGCTT TCTCAAGGGC TATTTCAGTG CCATCGCGAT GCTGCGCGAC
CGCCCGCAGG AAGCCGCCCG GCAGTTGCTC GCGCTGACCG GCCTGTCGCT GGCAGACCAG
GTGGAGGCCA TCTTGGGGGC GCAGTGGTAC GGCAGCGAAC AGCAGCGGAA CCTGCTCAAG
GTGCCAGGCA CCTATGTCGA TGGACTGCAG GGTTTGGCCG ACATGCTGGT GGCGCACAAA
CAGATCGACA AGGCCCCGGT CGTTGGCCAA TGGATCGATG CCTCGCACTT GGCATGA
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| Protein sequence | MHHLHRHRSR RHFLRACAAT AAIAHPVIGM AQGLAAQTTI HYGGSAWLGH YPAYLALKSG
TLPAASIDLR WQSFGTSSAR MSAVLSGGID IACTGIVSAL ALMARGSRHF AIIAVPEDFG
RVEGLFVRSD VSAIEHLRGK KIGVTFASSA HLLVLDLLAG AGLGPADVTV LNVPAPELPA
AMAAGQIDAA AAWTPQFHRI RALPGIKLLA DDTAFSLFKS HKVTPGPDVL VVRQAFADKN
PLAVRGFLKG YFSAIAMLRD RPQEAARQLL ALTGLSLADQ VEAILGAQWY GSEQQRNLLK
VPGTYVDGLQ GLADMLVAHK QIDKAPVVGQ WIDASHLA
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