| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0985 |
|---|
| Symbol | |
|---|
| ID | 4692764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1097124 |
|---|
| End bp | 1098542 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639848763 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_995780 |
|---|
| Protein GI | 121607973 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.701163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA TCTTTCCCCC GCTCGATGAC GATGGCTCGA CGGCGCAGCC GCCCGATCCC
GAACTGGCCC GGTTGCGCCT GCCACCGCAC TCGATCGAGG CCGAATCCAG CGTGCTCGGC
GGGCTGCTGC TGGACAACAA TGCCTGGGAC CGCGTCGGTG ACCTGCTGGT GCAAAGCCAT
TTTTACCGCC ATGAGCACCA GATGATCTAC ACCGCCATCG GCGTGCTGAT CACTGCCAGC
AAGCCGGCCG ACGTGATCAC CGTGTTCGAG CAGTTGCAGA ACCTGGGCCA GGCCCAGGAA
ACGGGGGGGC TGGCGTATTT GAACAACCTC GCGCAATATG TGCCGGGCGC CAGCAACATC
CGCCGCTATG CGGAGATCGT GCGCGAGCGG GCCATTTTGC GCAAGCTGAT CACGACCAGC
GACGAGATCT GCACCAGCGC CTTCAACCCG CAAGGCCGGA CGGTGGAGCG CATTCTCGAC
GAGGCCGAAG CCAGGATTTT TGCCATTGGC GAAGAAGGCT CGCGCACCAA GCAGGGTTTC
CAGTCGCTCG ACAAACTGGT GGTCGATCTG CTCGACCGCG TGCAGGAGTT GGCCGACAAC
CCGGTGGACG TGACCGGCGT GCCCACCGGC TTTGCCGATC TCGACCGGAT GACCTGCGGC
CTGCAGGCGG GCGACCTGGT GGTGCTGGCC GCGCGCCCGT CGATGGGCAA GACCTCGCTG
GCGGTGAACA TTGCCGAGCA TGTGGCGCTC GATGAGGGCC TGCCGGTGGC CATCTTCTCT
ATGGAAATGG GCGCCGCGCA ACTGGCGGTG CGCATCGTGG GCTCGATTGG CCGCGTGAAC
CAGGGCAACC TGCGCACCGG CCGGCTCAGC GATGAGGAGT GGCCACGCCT GACCGAAGCC
ATTGAAAAGC TGCGCACGGT GTCGCTGCAC ATCGACGAAA CCCCGGGCCT GACGCCCAGC
GAACTGCGCG CCAATGCCCG GCGTCTGGCG CGCCAGTGCG GCAAGCTCGG CCTGATCGTG
GTGGACTATT TGCAGTTGAT GAGCGGCTCG GACGCATCAG GTTCGGACAA CCGGGCCACC
GAACTGGGCG AGATCTCGCG CGGCCTGAAA ATGCTGGCCA AGGAACTGCA ATGCCCGGTG
ATGGCGCTCT CGCAGCTCAA TCGCTCGGTC GAGCAGCGCA CCGACAAACG CCCGCTGATG
TCCGACCTGC GCGAGTCCGG CGCCATCGAG CAAGATGCCG ACATCATCAT GTTCATCTAC
CGCGACGACT ACTACAACAA GGAGAGCAAG GAACCGAACG TGGCCGAAAT CATCATCGGC
AAGCAGCGCA ATGGCCCGAC CGGCACGGTC AAGCTGTTCT TCCAGAAGAA CCAGACGCGC
TTCGAGAACC TGGCCATCGG TTCGGGCGAC GATTTTTGA
|
|---|
| Protein sequence | MSAIFPPLDD DGSTAQPPDP ELARLRLPPH SIEAESSVLG GLLLDNNAWD RVGDLLVQSH
FYRHEHQMIY TAIGVLITAS KPADVITVFE QLQNLGQAQE TGGLAYLNNL AQYVPGASNI
RRYAEIVRER AILRKLITTS DEICTSAFNP QGRTVERILD EAEARIFAIG EEGSRTKQGF
QSLDKLVVDL LDRVQELADN PVDVTGVPTG FADLDRMTCG LQAGDLVVLA ARPSMGKTSL
AVNIAEHVAL DEGLPVAIFS MEMGAAQLAV RIVGSIGRVN QGNLRTGRLS DEEWPRLTEA
IEKLRTVSLH IDETPGLTPS ELRANARRLA RQCGKLGLIV VDYLQLMSGS DASGSDNRAT
ELGEISRGLK MLAKELQCPV MALSQLNRSV EQRTDKRPLM SDLRESGAIE QDADIIMFIY
RDDYYNKESK EPNVAEIIIG KQRNGPTGTV KLFFQKNQTR FENLAIGSGD DF
|
|---|
| |