| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0942 |
|---|
| Symbol | |
|---|
| ID | 4693567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1053517 |
|---|
| End bp | 1055925 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848720 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_995738 |
|---|
| Protein GI | 121607931 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAG CATTTTCACC AGCCCCCTAC AAGGACCCTG CGCAGCCCAT CGAGGCCCGT
GTGCGCGACC TGCTCGAGCG CATGAGCCTG GACGAGAAGA TCGCGCAGAT GCACGCCTTC
TGGCTGATCC TCTCGGAGGA CGGACAGCAC CATGTGCGCC CGAGCGTGGG GTTCATCGAC
GGCACCGATC AGCCATCGTT TCAGCGGCGC CTGGCCAACG GGGTCGGGCA GGTCACGCGG
CCGCTGGGCA CGCACAGCGT CGAGGCCGGC AGCGGACTGC GCGCGCTGAA CAAGTTGCAA
CGCTTTTTGC GCAATGAGAC GCGGCTGGGC ATCCCGGCGC TGTCGCACGA AGAATGCCTG
GTGGGCTTGA TGACCCGGGA TGCCACGGCT TTTCCTTCGA CGCTGGCGCT CAGCGCCAGT
TGGAACCCCG AACTCATCGA GTCCGTCGCG CAGCAGATAG GCCAGGAATG CCGGCAGCTT
GGCTGCCATC AGGGCCTGGC GCCGGTGCTC GATGTGTCGC GCGACGTGCG CTGGGGCCGC
ACCGAGGAGA CCTTTGGCGA AGACCCGTAT CTGGTCGGCG TGCTGGCCAC GCGCTATGTG
CGGGGATTGC AAGGCCCGCA GCGCGACCTG CTGGCAACGC TCAAGCACTA TGCCGGCCAC
TCGTTCAGCG AAGGGGCGCG CAACCACGCG CCGGTGCATC TGGGCTGGCG CGAGCTCAAT
GACGTTTTTT TGCTGCCGTT CGAGATGGCG GTCAAGCAGG CGAATGCCGG CTCGGTGATG
CCGGCCTACC ACGACATCGA TGGCGAGCCT TGCCATGCGT CCAGGCATCT GCTGACCGAA
GTGCTGCGCC ATCGATGGGG CTTTGACGGG CTGGTGGTGG CCGACTATGT CGGCGTCAGC
TTGCTGTACC GGCACCACCG GGTGGCGGCG GACGCGGCCG ATGCTGCGGC GCTGTCCTTC
AATGCCGGGC TGGATGTCGA GCTGCCGGCG GACGACTGCG CCATGCAACT GCGGCTCGCG
CTCGAGCGCG GGGCCATCAC GCTGGCCAAG ATCGACGAGA TCGTCGCCCG TGTGCTGAAG
GAAAAATTCC GCCTCGGCCT GTTCGAGCAG ACCTTCGAGG ATCGCGCCGA ACCGCCGAGG
CTGCGCAGCC CCGAATGCGT GGCGACCGCG CTCGAAGCGG CGCGCCAGTC GCTCGTGGTG
CTGGACAACC GCAGCGGCAT CTTGCCGCTG GCGCCGGCGG CGCGCCAGCG CATCGCGGTG
ATCGGCCCGA CGGCGGCCGA CCCCATGGGC CAGCTCAGCG GCTACAGCTA CCACGCCCAT
TCCATTGCCC CTGACGAAGT GCAAGACACC AGCCATATCG TCACCCCGCT GCAAGGCATT
CAGGCACTGT TCGGCGCGAG CCTGGTCCGC TACGAGCAAG GTTGCCAAAT TTTGGAGCAA
CGCAGCGCGG GAACACCGGT GTTCCCCGGG GATGTGGACG ACGCCGGCAA GCTGCCGCGC
CAGGCTTCGC CGGTATCGCG CCGCACCGAC CGCATCCCTG CCGCCGCGCA GGCCGCGCGC
AGCGCCGACC TGGCCATCGT CTGCGTTGGC GATCTGGCCG GCCTGTTTCA AAGAGGAACC
ATTGCCGAGG GCTCCGACAC CGACAGCCTG AGCCTGCCCG GGGTGCAGCA GCAGTTGCTC
GAAGCCGTCG TTGCCACCGG CACCCCCACC ATCGTGGTGC TGTCCGGAGG GCGCCCGTAC
AACCTCGGTG GTCTGGAAGA CAAGCTGGCG GCGTTCGTCA TGGCTTTTGC CGGCGGCCAG
GAAGGCGGCC GCGCGCTGGC CGAAGTCTTG GCAGGAAGGG TAGAACCCTC GGGCCGGTTG
ACGCTGTCCA CGCCGGTCAA CGTGGGCGCG ATGCCCTACT ACTACAACCA CAAGCTCAAA
AGCGGTGGCA CGCCGATCGC GCTGCATTTC GGCAGCCCTT ATCCGTTCGG GCATGGGCTG
AGCTATACCC GCTTCGAATA CCGGCGCTTG GCCGTCGCCA CGCCCGAGGT GCCGATCGAA
GACGGCCAGG TGGAGCTCAG CTTCGAGCTG GCCAACGTCG GCGAGCGCAG CGGCATCGAG
GTGGTGCAGT TGTACGTGCG GGACTGCCAG GCCAGCCTGG TGCGCCCGGT GCGCGAGCTC
AAAGCCTTCC GGCGCGTGGC GCTGGAGCCC GGGCACAGCG CGCGCGTCAC TTTCCGCGTG
CCGGTCGACA TGCTCGGCTT CACCGGCATG ACCGGCCAGC GTATCGTCGA ACCCGGCCTG
TTCGATCTGG CGCTCGGCGC ATCGAGCGCC GATATCCGCC TGCGCGCGCA GGTGCAAGTG
TGTGGCCCAT TGCGCACCTT GGGCCGCGAC TGGCGCATGG AAAGTCACAG CGAGGTCCAG
CCCCTCTAA
|
|---|
| Protein sequence | METAFSPAPY KDPAQPIEAR VRDLLERMSL DEKIAQMHAF WLILSEDGQH HVRPSVGFID
GTDQPSFQRR LANGVGQVTR PLGTHSVEAG SGLRALNKLQ RFLRNETRLG IPALSHEECL
VGLMTRDATA FPSTLALSAS WNPELIESVA QQIGQECRQL GCHQGLAPVL DVSRDVRWGR
TEETFGEDPY LVGVLATRYV RGLQGPQRDL LATLKHYAGH SFSEGARNHA PVHLGWRELN
DVFLLPFEMA VKQANAGSVM PAYHDIDGEP CHASRHLLTE VLRHRWGFDG LVVADYVGVS
LLYRHHRVAA DAADAAALSF NAGLDVELPA DDCAMQLRLA LERGAITLAK IDEIVARVLK
EKFRLGLFEQ TFEDRAEPPR LRSPECVATA LEAARQSLVV LDNRSGILPL APAARQRIAV
IGPTAADPMG QLSGYSYHAH SIAPDEVQDT SHIVTPLQGI QALFGASLVR YEQGCQILEQ
RSAGTPVFPG DVDDAGKLPR QASPVSRRTD RIPAAAQAAR SADLAIVCVG DLAGLFQRGT
IAEGSDTDSL SLPGVQQQLL EAVVATGTPT IVVLSGGRPY NLGGLEDKLA AFVMAFAGGQ
EGGRALAEVL AGRVEPSGRL TLSTPVNVGA MPYYYNHKLK SGGTPIALHF GSPYPFGHGL
SYTRFEYRRL AVATPEVPIE DGQVELSFEL ANVGERSGIE VVQLYVRDCQ ASLVRPVREL
KAFRRVALEP GHSARVTFRV PVDMLGFTGM TGQRIVEPGL FDLALGASSA DIRLRAQVQV
CGPLRTLGRD WRMESHSEVQ PL
|
|---|
| |