Gene Veis_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0847 
Symbol 
ID4691904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp941314 
End bp943506 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content69% 
IMG OID639848622 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_995645 
Protein GI121607838 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAA AAATCCTGAT CGCCAATCGC GGGGAAATCG CTTGCCGGGT GGCAGTGACG 
GCCAGGCGCA TGGGGATTCA AACCGTCGCC TTGCACTCCG ACGCCGACGC TCGCGCCAAA
CATGTGGCGC TGTGCGACGA GGCCGTGCAT ATCGGAGGCA ATGCCCCCAG GGACAGCTAT
TTGCGCCAAG ACCGCATCAT CGAAGCCGCC ACAGCCACGG GCGCGCAGGC CATCCACCCC
GGCTACGGTT TTTTGAGTGA AAACGCAGCG TTCGCCCGGG CTTGCGCCGA GGCGGGCCTG
GTCTTCATCG GCCCGCCCCC GTCGGCCATC GAGGACATGG GTCTCAAGGC CGGCGCCAAG
CAGCTGATGG AAAAAGCCGG CGTGCCCTTG GTGCCGGGCT ACCACGGCGC CAACCAGGAC
CCGGCGCTGC TCCAGGCCGA GGCCGAGCGC ATCGGCTACC CCGTGCTCAT CAAAGCCAGC
GCCGGCGGCG GCGGCAAGGG CATGCGCGCG GTGGAGCGGG CCGAAGACTT TGCCGCAGCC
CTGGCGGCGT GCAAGCGCGA AGCCAGCCAC AGCTTTGGCG ACGACGCCAT GCTGATCGAA
AAGTATGTGC AGCGCCCGCG CCATATCGAG ATGCAGGTGT TTGGCGACAG CCACGGCAAT
TACCTGCACC TGTTCGAGCG CGACTGCTCG GTGCAGCGCC GGCACCAGAA ACTGCTGGAA
GAAGCCCCCG CGCCCGGCAT GACGCCCGCG CTGCGCGCCC GGATGGGGCG CTGCGCCGTG
GCCGCAGCCC GCGCGGTGAA CTATGTGGGA GCCGGCACGG TGGAGTTCAT CGTCGAGCAG
CGCGCCGACG GCACGATGGA CTTCTTCTTC ATGGAAATGA ACACCCGCCT GCAGGTCGAG
CACCCGGTGA CCGAAGCCAT CACCGGCCAG GACCTGGTGG AGTGGCAACT GCGCGTGGCC
TGCGGCGAAC CGTTGCCGAT GACGCAGCAG CAGTTGCAGA TCACCGGCCA TGCGATCGAG
GCGCGCATCT GCGCCGAGAA CCCGGACAAG AGCTTTCTGC CGGCCACGGG CAGGCTCGAT
GTCTGCGAAT GGCCCGAGTG CGTTGCGTTC GGCTGCGGGA GCGAGGGCGC TGCCAGCGCG
GCAATGGGGG GCGCCGCCAG CGTGGCGCTG GGCGCCGCAA ACGTCGCAGC AGTGCGCGTC
GATTGCGGCG TGCGCCAGGG CGACAGCATC AGTGCGTTCT ACGACCCGAT GGTGGCCAAG
CTCATCGTCC ATGGCGACAC CCGCGAGCAG GCGCTGGCGC GGTTCGACCA GGCGCTGGCC
CAGACCCACA TCGTGGGCCT GGCCACCAAT GTGCAGTTCC TGCGCCGCGT GGCGCGCAGT
GCTTCGTTTG CCGGCGCCAG GCTCGACACG GCACTGATTG CGCGCGAGCA GGCGGCGTTG
TTCCATCAGG AGCCTGTGGG CCTGCCGCTG GCCGCCGCCG CCGCCGTGGC CCAGACCCTG
CTGCGCGAGC GTGCGCTCGA AGGCCCGAAC CCGTTCAGCC GCCGCGATGG TTTCCACAGC
CATGGCCTGG TGCGGCGCCG CTTCGGGTTC AGGTTTGGCG ACACGCAGGC CACGGCCTGG
CTGACCTATG AGCGCGGCGG CAGCCTGCAT CTGAGCGTGG GGGAGGGCGC GGCGCAAGTG
ACCGGGCCGC TGGCTTTCGA TCCGCAAATG AGCGGGCCGC CGGCCTTCGG CCCGCAAGTA
GTCGGACCGA AGGCCGAAAG CCCGCAAGTG GCAGGACCGC TGGCCGAAGG CCAGCGGGTG
CAGATCGATC TGCGGTTTGC CGGCCTGCGC ACCCGCGCCA GCGTATACAC CCAGGGCGAT
CTGGTCCATA TCTTCACCCC GCAGGGCGCC ACGCAGATAC GGGCCATCGA CCTGCTGGCC
CATGCGGGCG CGGCCGTGGC CGAAGGCGGG CGCCTGACGG CCCCGATGCC GGGCAAACTG
GTGTCATTCG CCGTGAAGGC CGGCGACAAG GTGGCCAAGG GCCAGCCGCT GGCGGTGCTG
GAGGCGATGA AGATGGAGCA CCTGATTGCC GCCCCCCAGG ACGGGGTGGT GCAGAAACTG
CTCTACGCGC CTGGCGCCCA GGTCGCCGAA GGGGCCGAAC TGCTCAGACT GCTGGCCTCG
CGCAGCCGCG AAGAACCAGC GAGGTCGCGC TGA
 
Protein sequence
MFKKILIANR GEIACRVAVT ARRMGIQTVA LHSDADARAK HVALCDEAVH IGGNAPRDSY 
LRQDRIIEAA TATGAQAIHP GYGFLSENAA FARACAEAGL VFIGPPPSAI EDMGLKAGAK
QLMEKAGVPL VPGYHGANQD PALLQAEAER IGYPVLIKAS AGGGGKGMRA VERAEDFAAA
LAACKREASH SFGDDAMLIE KYVQRPRHIE MQVFGDSHGN YLHLFERDCS VQRRHQKLLE
EAPAPGMTPA LRARMGRCAV AAARAVNYVG AGTVEFIVEQ RADGTMDFFF MEMNTRLQVE
HPVTEAITGQ DLVEWQLRVA CGEPLPMTQQ QLQITGHAIE ARICAENPDK SFLPATGRLD
VCEWPECVAF GCGSEGAASA AMGGAASVAL GAANVAAVRV DCGVRQGDSI SAFYDPMVAK
LIVHGDTREQ ALARFDQALA QTHIVGLATN VQFLRRVARS ASFAGARLDT ALIAREQAAL
FHQEPVGLPL AAAAAVAQTL LRERALEGPN PFSRRDGFHS HGLVRRRFGF RFGDTQATAW
LTYERGGSLH LSVGEGAAQV TGPLAFDPQM SGPPAFGPQV VGPKAESPQV AGPLAEGQRV
QIDLRFAGLR TRASVYTQGD LVHIFTPQGA TQIRAIDLLA HAGAAVAEGG RLTAPMPGKL
VSFAVKAGDK VAKGQPLAVL EAMKMEHLIA APQDGVVQKL LYAPGAQVAE GAELLRLLAS
RSREEPARSR