Gene Veis_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0823 
Symbol 
ID4691063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp913617 
End bp914747 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content61% 
IMG OID639848598 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_995621 
Protein GI121607814 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAA TGGCCAATCC CTCCAGCCCA GGCCCATTGT CGCCAGCGGA TCAGCAGTTT 
GTCCGCATCG ACAAACTGAG CAAGCGCTTC GACGAAGTCG CCGCAGTCGA CGAAGTGTCC
GTGGACATTG CCAAAGGGGA GATTTTTGCG CTCCTGGGCT CCTCCGGCTG CGGCAAGTCG
ACATTGCTGC GCATGCTGGC GGGGTTTGAA ACACCGACCA CGGGAAAGAT CACCCTCGAA
GGCGTGGACA TCGTCGGCCT GCCGCCGTAT GAGCGGCCGA TCAACATGAT GTTCCAGTCC
TACGCGCTGT TTCCCCATCT GAGTGTGTGG GAGAACGTGG CCTTCGGCCT GAAGCGCGAA
GGCATGCCCG CCGGCCAGAT TGGCGCTCGG GTGCAGGCCA TGCTCAACAT CGTGCAGCTC
GGCCCCTATG CCAAGCGCAA GCCGCACCAG TTGTCCGGCG GACAGCAGCA GCGCGTGGCG
CTTGCGCGGT GCCTGGCCAA GGGCCCCAGG CTGCTGTTGC TCGACGAGCC GCTGGGCGCC
CTGGACCGCA AATTGCGCGA ACAGACCCAG TTCGAGCTGC ACACCATCAT CAAGGAGGTG
GGGGTGACTT GCGTGCTGGT GACGCACGAC CAAGAGGAGG CCATGACCAT GGCGGACCGC
ATCGCCGTGA TGGGCGCCGG CAAGTTCATG CAGGTGGGCA AGCCGCACGA GATTTACGAA
ACCCCCAGTT GCAAATTCGT TGCCGACTTC ATTGGCAACG TCAATCTCTT TGACGGCAAA
CTGGTCGAAG ATGAACCCGA TTTCTGCGTG GTGGCCTCGG AATATGGCAA GTTCTATATC
GGCCACGGCA TCACCGGCAC GCGCGGCATG CCTGTGGCAG TGGCAGTGCG GCCCGAGAAA
ATCAATCTTT CGCGCACCGC ACCGCCCGAC ACCTCGCGCA ATGTATTCAA GGGCGTGATT
TCAGATAGCG GCTACTTCGG CAGTTTTTCC CTGTACCGGA TGCTGCTGCC AGGCGGCAGG
AAGTTACAGG TTCAGATCAC CCACCAACAC CGGCACATCG AGATGCTCAA CGACGGGGAG
GAAGCCTATG CCAGCTTTGC GCCGGATTCC CTGGTGGTGC TGACCTCCTG A
 
Protein sequence
MNAMANPSSP GPLSPADQQF VRIDKLSKRF DEVAAVDEVS VDIAKGEIFA LLGSSGCGKS 
TLLRMLAGFE TPTTGKITLE GVDIVGLPPY ERPINMMFQS YALFPHLSVW ENVAFGLKRE
GMPAGQIGAR VQAMLNIVQL GPYAKRKPHQ LSGGQQQRVA LARCLAKGPR LLLLDEPLGA
LDRKLREQTQ FELHTIIKEV GVTCVLVTHD QEEAMTMADR IAVMGAGKFM QVGKPHEIYE
TPSCKFVADF IGNVNLFDGK LVEDEPDFCV VASEYGKFYI GHGITGTRGM PVAVAVRPEK
INLSRTAPPD TSRNVFKGVI SDSGYFGSFS LYRMLLPGGR KLQVQITHQH RHIEMLNDGE
EAYASFAPDS LVVLTS