Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0736 |
Symbol | |
ID | 4694927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 812473 |
End bp | 813612 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848513 |
Product | multiple sugar-binding periplasmic receptor ChvE precursor |
Protein accession | YP_995536 |
Protein GI | 121607729 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.201323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCAG ACAGCAACCC CCTCGCCACC ACCCTTGCCT GCGCACCCCG GGCGCGCGGG CGCGGCCAAC CCCGGCGTGC AGCGCTCAAG GCCGCCATGC TCGGCCTGGC TCTGGCCGCC CTCGGCGCTG CGCCGCCGGT CTGCGCGCAG GACAAGGGCA GCATCGGCAT CGCCATGCCC ACCAAGTCGA TGGCGCGCTG GATCGCCGAC GGCGACAACA TGGTCAAGGT GCTGCACGAG CGCGGCTACA AGACCGATCT GCAATACGCC GAGGACGACA TTCCGACCCA ACTGGCGCAA ATCGAGAACA TGATCACCAA GGGCGCGAAG GTGCTGGTGA TCGCCTCGAT CGACGGCACC ACGCTGGCGC AGGTGCTGCA AAGCGCGGCC GACAAGGGCA TCAAGGTCAT CGCCTACGAC CGCCTGATCA AAGGCTCGAA AAACGTCGAC TACTACGCCA CTTTCGACAA CTTCCAGGTC GGCGTGCTGC AGGCCCATTC CATCGTCGAC AAGCTCGGGC TCAAGCAGGG CAAGGGGCCG TTCAACATCG AACTGTTCGG CGGTTCGCCC GACGACAACA ACGCTTTCTT CTTCTACGAC GGTGCGATGA GCGTGCTGCA ACCCTATCTC GACAGCGGCA AACTGGTGGT GCGCAGCAAG CAACTGGGCA TGAACAAGGT TGGCATATTG CGCTGGGATG GCTCTGCCGC GCAGGCGCGC ATGGACAACC TGCTGTCGGC CTACTACGGC AATGACAAGC TGCACGCCGT GCTGTCGCCC AACGACGCGC TGGCCACCGG CATCCTGTCC TCACTCAAGG GCCTGGGCTA CTGCACGGCC GGGCAGGCTT GCCCGGTGGT CAGCGGCCAG GATGCGGAAA TCCCCTCGGT CAAGTCGATC ATCAAAGGCG AGCAGTACTC CACCGTGTTC AAGGACACGC GCGAGCTGGC CCGGGTCGCG GCGAACATGG TCGATGCCGT GCTCTCCGGC AAGCAACCCG AGATCAATGA CACCAAGACT TACAATAACG GCGTCAAGAT CGTCCCCTCC TACCTGCTCA AGCCGGTGGC CGTGGACGCA TCGAACTGGC AAACCGTGCT GGTCGGCAGT GGCTATTACA AGGAGTCCCA GATCCGGTAG
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Protein sequence | MQPDSNPLAT TLACAPRARG RGQPRRAALK AAMLGLALAA LGAAPPVCAQ DKGSIGIAMP TKSMARWIAD GDNMVKVLHE RGYKTDLQYA EDDIPTQLAQ IENMITKGAK VLVIASIDGT TLAQVLQSAA DKGIKVIAYD RLIKGSKNVD YYATFDNFQV GVLQAHSIVD KLGLKQGKGP FNIELFGGSP DDNNAFFFYD GAMSVLQPYL DSGKLVVRSK QLGMNKVGIL RWDGSAAQAR MDNLLSAYYG NDKLHAVLSP NDALATGILS SLKGLGYCTA GQACPVVSGQ DAEIPSVKSI IKGEQYSTVF KDTRELARVA ANMVDAVLSG KQPEINDTKT YNNGVKIVPS YLLKPVAVDA SNWQTVLVGS GYYKESQIR
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