Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0612 |
Symbol | |
ID | 4692158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 680766 |
End bp | 682004 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639848389 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_995413 |
Protein GI | 121607606 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTTC GCTTGAACAG ATTCGCGCTG TATGCGGCAG TTGCCGCAGC CTCGGTTGGC CTATCGGTTG CTGCCCATGC GGCCGAGCCG ATCAAGATTG GCGTGGCCGG TCCTTTCACC GGCGGATCTT CCTCGATGGG GGTGAGCATG CGCGATGGCG TGCGGCTGGC GATCGATGAA ATCAACAAGG CCGGGGGCGT GCTGGGCCGC CCGCTGCAAG CCATCGAGCG TGACGACGAA GCCAAGAACG AACGCGGTGT GCAGATCGCC CAGGAACTGA TCAACAAGGA AAAAGTCAGC GCCGCCGTCG GCTATATCAA CACCGGCGTG GCACTGGCGG CGCAGCGCTT TTTCCAGGAT GCCAGGATTC CGGTGATGAA CAATGTGGCC ACCGGTTCGG TCATCACGCA CCAGTTCGAT GACCAGCCGG AAAACTACAT CTTCCGCAAT TCGGCGCATG ACAGCATACA GGCGCCGATG ATCGTCGAGG AGGCCATCAC CCGCCGCGGC TTCAAGAAGG TGGCGATTTT GGCGGACTCG ACCAACTACG GGCAATTGGG CCGCGCCGAT CTGGAAAAGG CGCTGGCGCT CAAGGGCATC AAACCGGTGG CGATCGAGAA GTTCAACATC AAGGATGTGG ACATGACGGC GCAACTGCTC AAGGCCAAGG AAGCCGGCGC CGAGGCCGTG CTGACCTACG GCATCGGGCC TGAACTGGCG CAGATTGCCA ACGGCATGAC CAAACTGGGC TGGAAGGTGC CGATGGTGGG CAGTTGGACC CTGTCGATGG CCAACTACAT CGACAACGCC GGCCCCGGTG GCGAAGGCGC GCGCATGCCG CAGACCTTCA TCCAGGAGCC GACCACGCCC AAGCGCCAGT CCTTCATCAT CAATTACCTG AAGACTTTCA ACCCGAAGAA TGCGCGCATC GACTCGCCGG TATCGGCTGC GCAGGGCTAT GACTCGATCT ACCTGCTGGC GGCCGCCATC CGGCAGGCCG GCTCCACCGA TGGCCCCAAG ATCCGGGCGG CGCTGGAAGA TCTGAAGACC CCGGTCGATG GGGTGGTGAC CACCTACACC CGGCCGTTCA CGGCCAAGGA CCATGAGGCC ATTACCGCCA ACATTCCGGT GATCGGCGAA GTCAAGGGCC AGCGCGTGGT CTACGCCTAT GCGCAGGATT TGCAGAAAGC CTCCGAAGTG CGCGTCAAGA GCGCCGTGGC CGAGCTGCCC AAGAAGTAA
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Protein sequence | MPFRLNRFAL YAAVAAASVG LSVAAHAAEP IKIGVAGPFT GGSSSMGVSM RDGVRLAIDE INKAGGVLGR PLQAIERDDE AKNERGVQIA QELINKEKVS AAVGYINTGV ALAAQRFFQD ARIPVMNNVA TGSVITHQFD DQPENYIFRN SAHDSIQAPM IVEEAITRRG FKKVAILADS TNYGQLGRAD LEKALALKGI KPVAIEKFNI KDVDMTAQLL KAKEAGAEAV LTYGIGPELA QIANGMTKLG WKVPMVGSWT LSMANYIDNA GPGGEGARMP QTFIQEPTTP KRQSFIINYL KTFNPKNARI DSPVSAAQGY DSIYLLAAAI RQAGSTDGPK IRAALEDLKT PVDGVVTTYT RPFTAKDHEA ITANIPVIGE VKGQRVVYAY AQDLQKASEV RVKSAVAELP KK
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