| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0578 |
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| Symbol | |
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| ID | 4690698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 647085 |
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| End bp | 648665 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639848356 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_995380 |
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| Protein GI | 121607573 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCG GTCTGTCACT GCGCGTCTCG CAGCACCTCA CACTGACCCC TCAGTTGCAG
CAGTCGATCC GGCTGCTGCA ACTGTCCACG CTCGAACTGA CGCAGGAAAT CGAGCAGATG
CTCGATGAAA ACCCGTTTCT CGAACGCATG TCCGACGAGG CCCCGCGCGA GGAGTTCGGC
CTGGACAGCG CCGACACGCC AGCGCAAGCC GATGACTACA GCGCCGACGA AGTGCTCTTT
TCCGCCGCAA CCGGCAGCAG CGCCGAAGCG CTCCCTGACG CCGACACCCC GGGCAGCGCT
GCGGACGAGC CCGACTGGGG CGGCGACGGC AGCGTGGAGA TGGCGCCCAG CGATGCCGAA
TGGGGCGGCG ACGCGCCGGC GAGCCAGCAC AACGACGCCG AAGGCGACGG GATCGAAGCC
ACCGAACTGG CCCAGAGCGA AGAATCGCTG GCCGCTTTCT TGCACCGCCA GGCGCTGGCG
CTGCGCCTGT CCGAAATCGA CCGCGCCGCG CTGTACTTCC TGATCGAATC GCTCAACGAC
GACGGCTACC TGGAAGACTC GCTCGAAGAA CTGGCCAGCG CCCTGGCCGG CCCGCAGAAC
CCGGAGCAAA TCGAAGAACT GGTGCACCGC TTCACCGTCG CCCAACGCCT GCTGCAAAGC
CTGGAACCGG TGGGCGTGGG CGCGCGCAAT CTGGCCGAAT GCCTGACGCT ACAGCTCAAC
GCCCTGGCAC GGGAGCGGGC GCCAGCCGCC GACCCGCAGA CCGTGCAAAC CGCCCTGCGC
ATCTGCCAGC AGCCGCTCCA AATGCTCGCC CGGCGCGACC TGCGCCGCCT GACCCAGGTC
TGCGGCGACA GCCAGGAGGG CACCCGCGCC GCGATGGCCC TGATCGCCCG CCTGGAGCCG
CACCCGGGGC GCCGCTTTGC CAATGTGCAG CGCAACGTCA TCGTGCCCGA CGTGATCGTG
CGCAAAACCG GGCGCGCCAA TGGGCGCGAC GGCCGACAGC ATTTCATCGT GCAGATCAAC
CCCGACGTGC TGCCCCGCCT GCGCGTGCAC GATATCTACG CCGGCGCGCT GCGCGGCCAC
AGGGGCGGCG CAGGCCACCA GGGCATGCAG CAACGCCTGC AGGAAGCGCG CTGGTTCATC
AAGAACATAC AGCAGCGCTT CGACACCATC TTGCGCGTCT CGCGCGCCAT CGTCGAGCGG
CAGAAAAACT TCTTCACCCA CGGCGAACTG GCCATGCGGC CGCTGGTGCT GCGCGACATC
GCCGACGAAC TGGGCCTGCA CGAATCGACC ATCAGCCGCG TGACCACCGC CAAATACATG
GCCACCCCGA TAGGCACCTA CGAACTGAAA TACTTTTTCG GCTCGGGCCT GGGCACCGAA
ACCGGCGGCA ACGCATCGAG CACCGCCGTG CGCGCGCTGA TCCGGCAATT CGTCGCTGCG
GAAAGCCAGG CCAAGCCCTT GTCCGACAGC CAACTCGCCG ACCTGCTCAA AGAGCAGGGC
ATAGAGTGCG CGCGCCGCAC CGTGGCCAAG TACCGCGAGG CGCTCAAGAT CGCGCCGGCC
AATCTGCGCC GGACGCTTTG A
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| Protein sequence | MKPGLSLRVS QHLTLTPQLQ QSIRLLQLST LELTQEIEQM LDENPFLERM SDEAPREEFG
LDSADTPAQA DDYSADEVLF SAATGSSAEA LPDADTPGSA ADEPDWGGDG SVEMAPSDAE
WGGDAPASQH NDAEGDGIEA TELAQSEESL AAFLHRQALA LRLSEIDRAA LYFLIESLND
DGYLEDSLEE LASALAGPQN PEQIEELVHR FTVAQRLLQS LEPVGVGARN LAECLTLQLN
ALARERAPAA DPQTVQTALR ICQQPLQMLA RRDLRRLTQV CGDSQEGTRA AMALIARLEP
HPGRRFANVQ RNVIVPDVIV RKTGRANGRD GRQHFIVQIN PDVLPRLRVH DIYAGALRGH
RGGAGHQGMQ QRLQEARWFI KNIQQRFDTI LRVSRAIVER QKNFFTHGEL AMRPLVLRDI
ADELGLHEST ISRVTTAKYM ATPIGTYELK YFFGSGLGTE TGGNASSTAV RALIRQFVAA
ESQAKPLSDS QLADLLKEQG IECARRTVAK YREALKIAPA NLRRTL
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