Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0518 |
Symbol | |
ID | 4692826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 584143 |
End bp | 585804 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639848296 |
Product | major facilitator superfamily transporter |
Protein accession | YP_995320 |
Protein GI | 121607513 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.330299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCG CTCATCCCGC ACCACGGCCG ATGACGCCTG AAGAGAAGAA AGTCATCTTC GCTTCATCGC TCGGCACCGT TTTCGAGTGG TACGACTTTT ATCTGTACGG CGCGCTCGCA AGCATCATCG CCAAGCAGTT CTTCAGCGGC CTGGATGCCG GCTCGGCCTT CATCTTCGCG CTGCTGGCGT TTGCTGCCGG CTTCATCGTG CGGCCGTTCG GCGCCATCTT CTTTGGCCGC CTGGGCGACA TGATCGGCCG CAAGTACACC TTCCTGATCA CCATCCTGAT CATGGGCCTG TCGACCTTCC TCGTCGGTAT CTTGCCCTCC TATGCAACGG TCGGCGTCGC GGCGCCAGTG ATCCTGATTG CGCTGCGTCT GCTGCAAGGC CTGGCGCTGG GCGGCGAGTA CGGCGGCGCA GCCACCTATG TGGCCGAGCA TTCTCCCCAT GGCAAACGCG GCGCCTACAC GTCCTGGATT CAGACCACGG CCACGCTGGG ACTGTTTTTG TCGCTGGCGG TGATTCTTGG CGTGCGCACC ACCTTGGGCG AAGAAGCTTT CGCCAGTTGG GGCTGGCGCC TGCCGTTCCT GCTGTCCATC GTGCTGCTCG GCATCTCGGT GTGGATTCGT CTGTCGATGA GCGAATCACC GGCCTTCCAG AAGATGAAGG CCGAAGGCAA GACCTCCAAG GCACCGCTGA CCGAATCCTT CGCCCGCTGG AAGAACCTGA AGATCGTGAT CCTGGCCCTG CTGGGCCTGA CCGCCGGCCA GGCCGCCGTC TGGTACTCGG GCCAGTTCTA TGCGCTGCTC TTCCTGACCG AGACGCTCAA GGTCGACGGC GCGACCGCCA ACATCCTGGT GGCCGTGGCG CTGATGATCG GCACGCCGTT CTTTGTCGTG TTCGGCACCC TGTCGGACCG CATCGGCCGC AAACCCATCA TCCTGACGGG CTGCCTGCTG GCTGCGCTGA CCTACTTCCC GGTGTTCGGC GCGCTGACCA AGGCCGCCAA CCCGGCGCTG GCCGAGGCCC AGGCGAAGAA CCAGGTGCTG GTGATGGCCG ACGCCAGCGA ATGCTCGTTC CAGTTCAACC CCACGGGGCA GGTCAAATTC ACCAGTTCCT GCGACATCGC CAAGCAGGTG CTGGCCCGGG CCTCGGTGAG CTACGAAAAC GTCCCGGCCG CAGCCGGCAC CCCGGCCACG ATCAAGATCG GAGAGACCGC GATCACCTCG TACTCCAGCA AAGGCCTGCC GGCTGACGAG GCCAAGAAAA AGGACGCCGA GTTCAAACAA GCGGTCGGAG ACGCGCTGAA GGCAGCCGGT TATCCCGCCA AGGCCGACCC GGAACGCATC GACAAGGTAA TGATCATCGC AATCATCACC TACCTGGTGC TGCTGGTGAC CATGGTGTAC GGCCCGATCG CCGCGATACT GGTGGAGATG TTCCCCACCC GCATCCGCTA CACCTCGATG TCGCTGCCCT ACCACATCGG CAACGGCTGG TTCGGCGGCC TGCTGCCCAC CTCGGCATTT GCCATCGTGG CCCAGACCGG CAACATGTAC AACGGCCTGT GGTTCCCCGT CGTCATCGCC GGCGCCACCG TCGTGATCGG GGGCCTGTTC ATCAAGGACA CCAAGGACGT CGACATCTAC GCCAACGACT GA
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Protein sequence | MATAHPAPRP MTPEEKKVIF ASSLGTVFEW YDFYLYGALA SIIAKQFFSG LDAGSAFIFA LLAFAAGFIV RPFGAIFFGR LGDMIGRKYT FLITILIMGL STFLVGILPS YATVGVAAPV ILIALRLLQG LALGGEYGGA ATYVAEHSPH GKRGAYTSWI QTTATLGLFL SLAVILGVRT TLGEEAFASW GWRLPFLLSI VLLGISVWIR LSMSESPAFQ KMKAEGKTSK APLTESFARW KNLKIVILAL LGLTAGQAAV WYSGQFYALL FLTETLKVDG ATANILVAVA LMIGTPFFVV FGTLSDRIGR KPIILTGCLL AALTYFPVFG ALTKAANPAL AEAQAKNQVL VMADASECSF QFNPTGQVKF TSSCDIAKQV LARASVSYEN VPAAAGTPAT IKIGETAITS YSSKGLPADE AKKKDAEFKQ AVGDALKAAG YPAKADPERI DKVMIIAIIT YLVLLVTMVY GPIAAILVEM FPTRIRYTSM SLPYHIGNGW FGGLLPTSAF AIVAQTGNMY NGLWFPVVIA GATVVIGGLF IKDTKDVDIY AND
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