Gene Veis_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0345 
Symbol 
ID4690345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp388453 
End bp391608 
Gene Length3156 bp 
Protein Length1051 aa 
Translation table11 
GC content60% 
IMG OID639848128 
Productacriflavin resistance protein 
Protein accessionYP_995153 
Protein GI121607346 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTTT CCGCCCGCTT CATCCAGCGC CCGATCGGCA CCACGCTGCT TGCCATTGCC 
ATTTTGCTGG TCGGCATCGC CGTCTGGCCT TTACTGCCGG TGGCGCCGCT GCCGCAAGTC
GATTTTCCGA CGATTCAGGT CTCCGCCAGT TTGCCGGGCG GCAGCCCGGA AACCATGGCC
TCGAATGTGG CGCAGCCCTT GGAGCGCCAA TTTTCGCTGA TCGCCGGTTT GTCGCAAATG
ACTTCGCAAA GCGCACTGGG CAGCACCCAG ATTACCTTGC AGTTCGATCT CAACCGCAAT
ATCGATGCTG CGGCCCTGGA TGTGCAGGCG GCGATCAATG CCTCCACCGG GCAGTTGCCG
ACCAGCCTGC CGAACCCGCC GACCTTCCGC AAGGTCAACC CTGCCGATTC GCCAATCATG
ATCATGTCGG TGCAATCGGA TGCCTTGCCG CTGACGCAGG TCAATGATTA CGCCGACAAT
ATTCTGGCGC AGCAGATTTC GCAAATTTCC GGCGTCGGTC TGGTCAGTGT CCACGGGCAG
CAAAAACCGG CGGTGCGGAT CCAGGTGGAT CCGGCCAGGC TGGCAACGCT GGGGCTGAGT
CTGGAGGATA TTCGCGGTGC CATTGCCACC ACCTCGGTCA ATCAGCCCAA GGGCACGGTG
GATGGCGCGC ACCAGAGTTT TACCGTCTAT ACCAATGACC AGTTGCTCAG CGCCGAACCG
TGGAATGACA TGGTGCTGGC CTACCGCCAT GGCGCGCCGG TGCGCGTGCG CGATATTGGC
GTGGCCATCG ATGCGCCGGA AAACAATAAA ATCGCGGCCT GGGCCTATGC CGGTGCGATG
GCGCCGTCCG ATGACACGCT TGCCAATGGC CGCGCCATCG TATTGGCGAT TACCAAACAA
CCGGGCGCCA ACGTGATCGA AACCGTCGGT CGCATCAAGG CCGCGATGCC GCGCCTGCGC
GCCGCGATTC CCGCCAGCGT GCGCGTCGAT ACGCTGATCG ACCGCACCCA GACCATTCGC
GCCTCGGTCG GCGATGTCGA GTTCACGCTG GTGCTGAGCA TCGCGCTGGT GGTGATGGTG
ATTTTCGTCT TTCTGCGCAA TGTGGCCGCC ACGCTGATCC CCGGCATTAC CGTGCCGCTG
GCGCTGATGG GCACGGCGGG CGTGATGTAT CTGGCCGGCT ACAGCCTCGA TAATCTGTCG
CTGATGGCGC TGACGATTGC GGTCGGCTTC GTGGTCGATG ACGCCATCGT GATGCTGGAA
AACATTTACC GCCATGTCGA AGCAGGCATG ACGCCGATGC AGGCCGCGCT CAAAGGCGCC
AGCGAAATCG GCTTTACCAT TATCTCCATC TCGGTCTCGC TGGTGGCGGT GTTCATTCCG
CTGCTGCTGA TGGGTGGCAT CGTCGGTCGG CTGTTCCGCG AATTCGCCGT CACCGTGACC
TTGACCATTG CCGTCTCGGT CATCATCTCG CTGACGCTGA CGCCCATGCT GTGCTCGCGC
TTTCTGAAAA ACAGCCATGC GGCGCGGCAC GGCAAGCCAT ATCAACTATT CGAGCGCTTT
TTCGACATTC TGCAAAAGGG CTACCAGCGC AGCCTCGATG TCGTGATGCG CCATCAGTTC
GTGACGCTGC TGACCTTTAT CGGCACCATG GCCATGACGG TCATGCTGTT CGTGGCGATT
CCCAAGGGCT TCTTCCCGCA GCAGGACAAT GGCGTGATCG TCGGCTTTGC CGAATCGGCG
CAGGATATTT CTTCACAAGC GATGCAGCGC CATTTGCTGC AGGTGGCAGA AATCGTGCGC
AAGGACCCCG ATGTGGCTGG TTTTGCGATG AGCGCCGGCT CGACCACCTT CAATACCGGC
AATTTCTTCA TTGCCTTGAA ACCCACGGAT GCAGGCCGCA CGGCCAGCGC CAGCGAGATC
ATCACCCGCC TGCGCCCGCA AATTGCCGGC ATCCAGGGCG TCAACCTGTT CATGCAGGCC
AGCCAGGACA TCAACGTCGG TGGCCGTCTG GCGCGCACGC AATATCAGTA CACCTTGACC
GACTCGAATC TGGATGAGCT CGATACCTGG GCGCCCAAAA TGGTCGAGCG CCTGCGCCGG
ATGAAGCAAT TGACCGATGT CGTCTCCGAC CAGCAAAACA ATGCCGCCAC CGCCACCATC
ACCATCGACC GCGCCCGCGC CTCCAGTTTC GGCATATCGC CAGCACTGAT CGATGCAAGC
ATTTACGACG CCATCGGCCA ACGCCAGGTG GCGCAATATT TCACGCAAAT CAACAGCTAC
CATGTGGTGC TGGAAGTGAC GCCGGCATTG CAACGAGACC CGGCGCTGTT CAACAAGCTC
TACCTGACTT CGCCGCTCAC CGGCCAGCAA GTGCCGCTGT CCACCTTCAT CGAGGTCGAT
ACGAGCAAAA CCGCCTATTT ATCGATCAGC CATCAGGGCC AATTTCCGGC AGTGACGATT
TCCTTCAACC TGGCCGCAGG CGTATCGTTA GGCGAAGCCG TCGATGCGAT CAACCGGGCG
CAGGCTGAGA TGGGCGTGCC GACCACGCTG ACCGGCGCCT TCCAGGGCAC GGCCAAAGCC
TTTGGCGATT CGCTCTCGTC GCAGCCCTAC TTGATCGCGG CGGCGCTGAT TGCGGTGTAT
ATCGTGCTCG GTCTGCTGTA TGAAAGCTAC ATCCATCCGC TGACGATTTT GTCAACGCTG
CCATCGGCTG GCGTCGGCGC GCTGCTGATT CTGATGGCGG GCGGTTATGA TCTCAGTGTG
ATCGCGTTGA TTGGTATTAT TTTGCTGATC GGCATCGTCA AGAAAAACGG CATCATGATG
ATCGACTTCG CACTGACCGC CGAGCGGCAA CAGGGCATGA AACCGCAAGC AGCCATCTAC
CAGGCTTGCC TGCTGCGCTT TCGCCCGATC ATGATGACCA CCATGTGTGC GCTGCTGTCG
GGCCTGCCGC TGATGCTGGG CCATGGCGCC GGCTCCGAAC TGCGCCGTCC GCTGGGTTAT
GCGATGGTCG GCGGCCTGGT GTTATCGCAG GCGCTGACGC TGTTTACCAC ACCGGTGATC
TATCTGTATC TGGACCGTGC GCATTACTGG TACATGGGCA GGAAAAAATC AAAACATGCG
GGAATGATAC CAGCCATCGA ATCTGATGCG TATTGA
 
Protein sequence
MSVSARFIQR PIGTTLLAIA ILLVGIAVWP LLPVAPLPQV DFPTIQVSAS LPGGSPETMA 
SNVAQPLERQ FSLIAGLSQM TSQSALGSTQ ITLQFDLNRN IDAAALDVQA AINASTGQLP
TSLPNPPTFR KVNPADSPIM IMSVQSDALP LTQVNDYADN ILAQQISQIS GVGLVSVHGQ
QKPAVRIQVD PARLATLGLS LEDIRGAIAT TSVNQPKGTV DGAHQSFTVY TNDQLLSAEP
WNDMVLAYRH GAPVRVRDIG VAIDAPENNK IAAWAYAGAM APSDDTLANG RAIVLAITKQ
PGANVIETVG RIKAAMPRLR AAIPASVRVD TLIDRTQTIR ASVGDVEFTL VLSIALVVMV
IFVFLRNVAA TLIPGITVPL ALMGTAGVMY LAGYSLDNLS LMALTIAVGF VVDDAIVMLE
NIYRHVEAGM TPMQAALKGA SEIGFTIISI SVSLVAVFIP LLLMGGIVGR LFREFAVTVT
LTIAVSVIIS LTLTPMLCSR FLKNSHAARH GKPYQLFERF FDILQKGYQR SLDVVMRHQF
VTLLTFIGTM AMTVMLFVAI PKGFFPQQDN GVIVGFAESA QDISSQAMQR HLLQVAEIVR
KDPDVAGFAM SAGSTTFNTG NFFIALKPTD AGRTASASEI ITRLRPQIAG IQGVNLFMQA
SQDINVGGRL ARTQYQYTLT DSNLDELDTW APKMVERLRR MKQLTDVVSD QQNNAATATI
TIDRARASSF GISPALIDAS IYDAIGQRQV AQYFTQINSY HVVLEVTPAL QRDPALFNKL
YLTSPLTGQQ VPLSTFIEVD TSKTAYLSIS HQGQFPAVTI SFNLAAGVSL GEAVDAINRA
QAEMGVPTTL TGAFQGTAKA FGDSLSSQPY LIAAALIAVY IVLGLLYESY IHPLTILSTL
PSAGVGALLI LMAGGYDLSV IALIGIILLI GIVKKNGIMM IDFALTAERQ QGMKPQAAIY
QACLLRFRPI MMTTMCALLS GLPLMLGHGA GSELRRPLGY AMVGGLVLSQ ALTLFTTPVI
YLYLDRAHYW YMGRKKSKHA GMIPAIESDA Y