Gene Veis_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0343 
Symbol 
ID4690805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp386365 
End bp387741 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content60% 
IMG OID639848126 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_995151 
Protein GI121607344 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.769109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT CCATCATTGC GCGTCTGGTC ATCATGTTTG CCGCTGCGGC GCTGATCATT 
TTCTCGCTGA TCGGCAGCGT GCTCTACGCC GTGGTCGACA ATGAATTGCT GCACCACGAG
CGCAACAGCC TGGTCACGAC CTTCAAGGAC ATCGAATACA TGGTGTCGCG GGCAGGCACC
ACCGAGCGCT GGGCGCATGT CCAGGTCAAA CTCGATACAT TGACGCCAGC CGACGGCAAG
GTGCGATTCT GGATTTTCAG CGACGACCCG CGCTTTGGCT ACGGCAAAGA CCTGGCCGAA
TTGCACGAAT TCGCCAACCA CCCCAATAAC CTCGGCAGGA TGAGCATCAA AGGCAAAAAA
TACCCGCTCC ACACGCTGAC CAGGATATTG CCCGCCTATC TCGACCGCCC CGCCATTCGC
CTCACCGTCG GCGTGGACGC CGCATCCTAT TTTGAAACCC TGCGTACCTT CGTCGCCGCC
ATGACGGGCC TGTCGCTGGC CGGCGTTCTG CTGGTCATTC TGTGCGGTTA CTGGATTGCC
CGCACCGGCT TGCAGCCATT GAAGAAAATG TCGGACAAGG CACAGACGCT CAGCCCGAAA
ACCCTCTCGG AACGGCTGAC CCTCTCGGCC TTGCCGGATG AATTGTCCGA TCTGGCGCAA
GCCTTCAACG GCGCGCTGGA TCGGATGGAA AACGCCTACA AGCAACTGGA AGCCTTCAAT
GCCGATGTCG CCCACGAATT GCGCACACCA CTGGCCAATT TGATTGGCGA AACCCAGGTC
GCCCTGTCGC GCGAACGCAG CGCGCCTGAA TTTGAATCGG TGCTGCAATC GAATCTGGAA
GAAATGGACC GGCTGCGCTC CATCATCAAC GACATGCTGT TTCTGGCCCG CTGCGACCAG
GGCGAAGCCG CCACCGGCCT GGTGCACGCA CTGATTGCAG ACGAGGTGCA AAAGACCATG
GACTTCTTTG AATTCGTCCT CGACGAAACC GGGATGCGCG TGGAAATCAG CGGCGACACC
CACGCCACCG CACTGATTGA AACCTCGCTG TTTCGTCGCG CACTGACCAA CCTGCTGCAA
AACGCCATCC AGCACTCCCC GGCAGGCGCC TGCATCGAGG TCGCGATCGA CGCCAAAAAC
CACGGCGTGC AAATCGCGGT ATCCAACCCG GGAGAACCGG TCGAACAAGG CCATCTGCCC
CGGCTGTTTG ACCGCTTTTA TCGCGTCGAC ACGGCACGGC GCGACATCAA CGGCATCCAC
GGCCACGGCC TCGGCCTGGC GATTGTCAAG GCCATTGCGC TGATGCACGG CGGCAGCGTG
TTTGCCGCCA GCACAGGGGG TGTGACCACC ATAGGATTTA CTACGGCGCG GTTTTGA
 
Protein sequence
MKNSIIARLV IMFAAAALII FSLIGSVLYA VVDNELLHHE RNSLVTTFKD IEYMVSRAGT 
TERWAHVQVK LDTLTPADGK VRFWIFSDDP RFGYGKDLAE LHEFANHPNN LGRMSIKGKK
YPLHTLTRIL PAYLDRPAIR LTVGVDAASY FETLRTFVAA MTGLSLAGVL LVILCGYWIA
RTGLQPLKKM SDKAQTLSPK TLSERLTLSA LPDELSDLAQ AFNGALDRME NAYKQLEAFN
ADVAHELRTP LANLIGETQV ALSRERSAPE FESVLQSNLE EMDRLRSIIN DMLFLARCDQ
GEAATGLVHA LIADEVQKTM DFFEFVLDET GMRVEISGDT HATALIETSL FRRALTNLLQ
NAIQHSPAGA CIEVAIDAKN HGVQIAVSNP GEPVEQGHLP RLFDRFYRVD TARRDINGIH
GHGLGLAIVK AIALMHGGSV FAASTGGVTT IGFTTARF