Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0298 |
Symbol | |
ID | 4693756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 335266 |
End bp | 336207 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639848082 |
Product | LysR family transcriptional regulator |
Protein accession | YP_995107 |
Protein GI | 121607300 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.202952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCACA AATTCGATCT GGCCGACATA CAGGCTTTCG CCGCCGTGGC CGAGTTGCAG AGCTTTCGCG CTGCGGCCGA ATCCATCCAC CTGTCGCAGC CGGCCTTCAG CCGCCGCATC GACAAGCTCG AGCAGGCCCT GGGCGTGCGC CTGCTCGACC GCAGCACGCG CCGCGTCACG CTCACCGCCG TGGGGCGCGA CTTTGCGCGC AAGACGCGGC TGTGGCTCGA TGAGTTGGAC GGCATGCTGA TGGGCCTGGG GGATGTGGCG GCGCGGCGCA TGGGCGAGGT GACCATTGCC TGCGTGCCGT CGGCCGTGTA TTACTTTCTG CCGCAGGTGG TCAAGCGCTA CCACGAGCGC TTTCCGAAGA TCCGCGTGAA GGTGCACGAT GCCAGCGCCA ACGAGGTGCT GGTGGCCGTG GCGCAGGGCG AGGCGGACTT CGGCCTGAAC TTCATCGGCA GCCAGGAGGC CGAGATCGAA TTCAAGCCGG TGCTGGTCGA GCGCTTCGTG GCCGCCTGCC GGCGCGACCA TGTGCTGGCC CGGCGCAAGA AGGTGACCTG GGCCGACCTG GGCCAGCATG ACTACATGTC GGTGGGCAAG ACCTCGGGCA ACCGGCTGCT GATGGACCTG GCGCTGGCCA ATGTTCCCGA CCGACCGCAA TGCCTGTACG AGGCCAAGCA TGTGACCACG CTGCTCGGGC TGGTCGAGGC CGGCCTGGGC GTGGCGGCCG TGCCGGGCCT GGCGATGCCG GGCCGGGAGC ACCCGACGCT GGTCAGCATC GCGCTGGTGG AGCCGGTGGT CACGCGGCAG ATGGGGCTGA TCAAGCGCCG GGGGCGGTCC CTGTCACCGG CCGCGCAGCA ACTGTATGAA CTGCTGGCGG CCACCCGCTC TGCGCGCCTG CGCAATGGCC CGGCGCGACA AAAAATACAA TCGGCGCGAT GA
|
Protein sequence | MPHKFDLADI QAFAAVAELQ SFRAAAESIH LSQPAFSRRI DKLEQALGVR LLDRSTRRVT LTAVGRDFAR KTRLWLDELD GMLMGLGDVA ARRMGEVTIA CVPSAVYYFL PQVVKRYHER FPKIRVKVHD ASANEVLVAV AQGEADFGLN FIGSQEAEIE FKPVLVERFV AACRRDHVLA RRKKVTWADL GQHDYMSVGK TSGNRLLMDL ALANVPDRPQ CLYEAKHVTT LLGLVEAGLG VAAVPGLAMP GREHPTLVSI ALVEPVVTRQ MGLIKRRGRS LSPAAQQLYE LLAATRSARL RNGPARQKIQ SAR
|
| |