| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0188 |
|---|
| Symbol | |
|---|
| ID | 4692903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 207500 |
|---|
| End bp | 208189 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639847973 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_994998 |
|---|
| Protein GI | 121607191 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.054457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGCGG GCGGCATTGT GTGTGAGACT CGATCCTCTT GTGAAAGTTT TACAAAGCAT
TCCGTGCCGC CATTGCCGAC TCGTCCGCCT CCAGCCCCCG GGGTGCGGCG CATCCATTCG
ATCATCGACC TCTGGCTCGG GGAGCAATTG CGCCGAAGGC GGCAGGCGCT GGGCCTGCCG
TTGCAGCAAG TGGCCCGGGC TTGCGGTATT TCGGTCAGTC TGCTGAGCCA GCTCGAACGC
GGGCTTCGCT CCATCTCCAT GCGCACGCTC GGCGCGCTGG CGCAGGAACT GCGACTGCCC
ATCGAAACGC TGGTGCGCAA CACCCGGTAC AGCGAAGGCG AGGCCGAAGG CGCAGTGGCG
CGTGCCGGCA CGCACAGGCG CATCGACCTC GGCGACAAAG GCATCCACAA GGAAAATCTG
ACGCCGCCGG CCGCTTCGGG TGGCGTTCAG ATGTACCGCG CGGTGATCGA TCCGGGCGGC
TCCACCGGCG ACGACCTGTT TCTCACGCAC AAGGGCGAAC AGGTCGGCTA CGTCATCGAG
GGCCAGCTCG ATCTGTTCGT GCAGGAACGG CTGCTCAAGC TGAAGGCCGG CGACAGTTTT
TGCTACGGCG GCGACATGTC GCGCCGGTGG CGCAACCCCG GTCAGACCAG CACCACCATC
TTGTGGGCGA TCACATGTTC ACCAGGATGA
|
|---|
| Protein sequence | MVAGGIVCET RSSCESFTKH SVPPLPTRPP PAPGVRRIHS IIDLWLGEQL RRRRQALGLP
LQQVARACGI SVSLLSQLER GLRSISMRTL GALAQELRLP IETLVRNTRY SEGEAEGAVA
RAGTHRRIDL GDKGIHKENL TPPAASGGVQ MYRAVIDPGG STGDDLFLTH KGEQVGYVIE
GQLDLFVQER LLKLKAGDSF CYGGDMSRRW RNPGQTSTTI LWAITCSPG
|
|---|
| |