Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0170 |
Symbol | pcmA |
ID | 4692682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 191965 |
End bp | 193296 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639847955 |
Product | protocatechuate 4,5-dioxygenase |
Protein accession | YP_994980 |
Protein GI | 121607173 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.827608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGG ACAAACCCTA TCTGGACGTG CCCGGCACGA TCATTTTTGA CGCCGAGCAA AGCCGCAAAG GCTACTGGCT CAACCAGTTC TGCATGAGCC TGATGCAGGC CGACAACCGC GCACGCTTCA AGGCCGACGA GCGCGCCTAC CTCGACCGCT GGGCGCTGAC CGAAGCGCAA AAACAGGCCG TGCTCGCGCG CGACCTGAAC CAATGCCTGC GCCTGGGCGG CAACATCTAC TTCCTGGCCA AAATCGGCGC CACCGACGGC AAGAGCTTCC AGCAAATGGC CGGCAGCATG ACCGGCCTGA GCGAAGAGCA ATACCGCGAC ATGATGATCA GTGGCGGGCG CCCGGCCAAC GGCCTGCGCG TGCCCGGAGA AAACGGCGCA ACCCGGACGC AGCCCGCGCC GCCGGCGCAG CCAACCGGCG CGCGCCCGGC CAAGGCCCGG ATCAGCGCTG CGGTCTTCAG CTCCCATGTC CCGGCCATCG GCGCCGCCAT CGACCAGGGC AAGACACAGC AAGACTACTG GAAGCCGCTG TTTGCCGGCT ACGACTTGTC CCGGCAATGG CTCAGGGAGC ACCGGCCCGA CGTGATCTTG CTGGTCTACA ACGACCACGC CACGGCATTC AGCCTGGAGA TGATCCCGAC CTTTGCCATC GGCACGGCCG CCCAATTCCA GCCGGCCGAC GAAGGCTGGG GCCCGCGCCC CGTGCCCCCG GTCATCGGCC ACCCGGAACT GGCCGCGCAC ATCGCGCAAT CGGTGATACA GCAAGACTTC GACCTGACCA TCGTCAACAA AATGGACGTG GACCACGGCC TGACGGTGCC GCTGTCGCTG ATGTGCGGCC AGCCCCTGGC CTGGCCCTGC CCGGTCATCC CCTTCGCGGT CAATGTGGTG CAATACCCCG TGCCCAGCGG CCGCCGCTGC TACCAGCTCG GCCAGGCCAT CCGCCGGGCC ATCGAAAGCT ACGACGCAGA CCTGAACGTG CAAATCTGGG GCACGGGCGG CATGAGCCAC CAGTTGCAAG GCCCCCGGGC CGGGTTGATC AACAAAGAAT TCGACAACGC CTTCCTGGAC CAACTCATCA CGGACCCCGA AGCCGCAGCC AGCATCCCCC ATATCGACTA CGTGCGCGAG GCGGGCAGCG AAGGCATCGA GTTGGTGATG TGGCTCATCG CGCGCGGCGC GATGTCGGAT GTGGCGCGCG GTGCGACGCC GGATGCGGCG GCCGATGGCG CCACCGGCAG GCCCCCGAAG GTCGTGCACC GCTTCTACCA TGTGCCCGCA TCCAACACGG CCGTCGGCCA CCTGATTTTG GAGAACCCAT GA
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Protein sequence | MSLDKPYLDV PGTIIFDAEQ SRKGYWLNQF CMSLMQADNR ARFKADERAY LDRWALTEAQ KQAVLARDLN QCLRLGGNIY FLAKIGATDG KSFQQMAGSM TGLSEEQYRD MMISGGRPAN GLRVPGENGA TRTQPAPPAQ PTGARPAKAR ISAAVFSSHV PAIGAAIDQG KTQQDYWKPL FAGYDLSRQW LREHRPDVIL LVYNDHATAF SLEMIPTFAI GTAAQFQPAD EGWGPRPVPP VIGHPELAAH IAQSVIQQDF DLTIVNKMDV DHGLTVPLSL MCGQPLAWPC PVIPFAVNVV QYPVPSGRRC YQLGQAIRRA IESYDADLNV QIWGTGGMSH QLQGPRAGLI NKEFDNAFLD QLITDPEAAA SIPHIDYVRE AGSEGIELVM WLIARGAMSD VARGATPDAA ADGATGRPPK VVHRFYHVPA SNTAVGHLIL ENP
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