Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0165 |
Symbol | |
ID | 4692089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 187003 |
End bp | 187923 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639847950 |
Product | LysR family transcriptional regulator |
Protein accession | YP_994975 |
Protein GI | 121607168 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.945791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTCA GACAGATCGA ATACTTTGTG CGCGTGGCCG AGTTGGGCAG TTTTACCCGG GCCTCGGTGG TGCTGGGCAT TGCCCAACCC GCGCTGAGCC GCCAGGTGCG CCTGCTGGAG GTGGAACTGC GCCAGAGCCT GCTGCTGCGC AACGGTCGGG GCGCCACCCC CACCGAGGCC GGCCAGTTGC TGCTCAAGCA TGGCCGCAGC ATCTTGCACC AGGTGGCGCG CGCCCGCGAG GAGCTCGGTC GCGTGCGCGG CGCGCTGGCC GGGCGCGTGG CCATCGGCCT GCCGCCGAGC ATCGCCAAGG TGCTGACGGT GCCGCTGACC CGCGCCTTTC GCGCGCAACT GCCCGATGCG GCGCTGGCCA TCAGCGAGGG CTTGTCGGTG GCCATGCAGG AATTGCTGAC CACGGGCCTG CTCGACATCG CGCTGCTGTA CAACACCGCG TCCGGGCCCG GCATGGAAAC CACGGCGCTG CTGGAAGAAG ACCTGTTCCT GGTGCAGCGC CGCAGCCCCG GGCAGCCCGA TGCCGAGGCC CTGGCCCAGG CGCCGTTGCC GCTCGATGAA CTGTCCCGCT TCCCGCTGGT CATCCCCACG CGCCCGAACG CCCTCCGCAT GCTGGTCGAG TCGGAACTGG CCGCCCGGGG CCAGCGCCCG CAGATCAGCC TGGAAATCGA CGGCGTGGCC GCCATCCTCG ACCTAGTGGC CGATGGCGCC GGCTGCGCCG TGCTGCCGAT GAACGCGGTC AGCACCTGCG GCAAGCCCGA TGCGTTCGAC GCCCGGCCGA TCGACGGCGC CAGCCAGACC CGCCTGCGCA GCAAGCTGTT CATGGCCGTC AGTTCGCAGC GCCCGGCCAC ACTCACGCAG CAGGCCATGG CGCAACTGAT ACGCAGCACG CTGCAAACGC TGTACCGGTG A
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Protein sequence | MDLRQIEYFV RVAELGSFTR ASVVLGIAQP ALSRQVRLLE VELRQSLLLR NGRGATPTEA GQLLLKHGRS ILHQVARARE ELGRVRGALA GRVAIGLPPS IAKVLTVPLT RAFRAQLPDA ALAISEGLSV AMQELLTTGL LDIALLYNTA SGPGMETTAL LEEDLFLVQR RSPGQPDAEA LAQAPLPLDE LSRFPLVIPT RPNALRMLVE SELAARGQRP QISLEIDGVA AILDLVADGA GCAVLPMNAV STCGKPDAFD ARPIDGASQT RLRSKLFMAV SSQRPATLTQ QAMAQLIRST LQTLYR
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