Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0119 |
Symbol | |
ID | 4692110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 144204 |
End bp | 145247 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639847905 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_994930 |
Protein GI | 121607123 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0810079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGA AAGCCGACAA ACCCGGCATC AAGGATGTTG CAACGCGCGC CGGCGTCTCG CTGGGCAGCG TATCGCGTGT GATCAACAAG GTCGAGAACG TCAGCCCCGA ACTGCGCCAG CGCGTGCTGC ACGCCATTGC CGAACTGGAC TACCGCTTGA ACCACGCGGC GCAGACGCTG CGCTCGCGCT CCTCGCGCAC GATAGGCTGC ATGTTCACCG ACGTGACCAA CCCGCTGTAC GCCAATCTCT ACCGCATCTA CGAGGAGCGG TTTCGCGCCA ACGGCTACAT GGTGCTGCTG GCCAACAGCC TGAACAACCC CGAGTGGGAG TTGGAGATCC TCTCGATGTT CCAGAGCCGG CGCATGGACG GCATCATCAT CGCCCCCGGC AACGAGCGCA ACGCCAGCGT GCTGGCGGCG GTGCAGAAGA TCGACCTGCC GGCCGTGATT CTCGACCGCG ACATGAATGT GAACCAGGAC CTGGTGCTGT TCGACCATGC GCCGGCGGTC CAGCAGGCCA TGGAGCACCT GATCGACCAA GGACACCGCG AGATCGCCCT CGTGATCTCG GGCACGCAGA CCCGGCCCAT GCTCCGGCGC ATCGAGGGCT ACCAGGCCGG CTTTGCGGCG CGCGGGCTGC CGGCCCGGGC CGACCTGCAA GTCTTGCTGC CCGCCTCCAC CGCGCCGGCG TTCGATCTGG TGCATGAACT GTTGCAGCGG CCGGCGCGTC CCACGGCGCT GCTCACGCTC GGCACCAGCG TGCTGGCCGA TGTGCTCAAC GCCATCAGGG CGCAGGGCCT GCGCATTCCG CGCGACATCT CGGTGGTCTC GACGGGCGAG CCGGATTTTG CGCGCAGCCA CCAACCGCGC ATCAGCAGCG TGACCGTCGA CCTCGACGCC GCAGTGCGGG AAAGCACGGC GCTGCTGCTG ACCCGGATAC GCGAGGGCCG CGCCGCCGCG CCGCGCCGCG TGGTGGTGCC GACGATATTC ACGCTGCGCG GGTCATGCGG CCCGGCTCCA GCCACCGCGC CGCGCACGCG GTGA
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Protein sequence | MKPKADKPGI KDVATRAGVS LGSVSRVINK VENVSPELRQ RVLHAIAELD YRLNHAAQTL RSRSSRTIGC MFTDVTNPLY ANLYRIYEER FRANGYMVLL ANSLNNPEWE LEILSMFQSR RMDGIIIAPG NERNASVLAA VQKIDLPAVI LDRDMNVNQD LVLFDHAPAV QQAMEHLIDQ GHREIALVIS GTQTRPMLRR IEGYQAGFAA RGLPARADLQ VLLPASTAPA FDLVHELLQR PARPTALLTL GTSVLADVLN AIRAQGLRIP RDISVVSTGE PDFARSHQPR ISSVTVDLDA AVRESTALLL TRIREGRAAA PRRVVVPTIF TLRGSCGPAP ATAPRTR
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