Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0101 |
Symbol | |
ID | 4692162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 123422 |
End bp | 125413 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639847887 |
Product | putative transcriptional regulator |
Protein accession | YP_994912 |
Protein GI | 121607105 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0220475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.799174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTCCA TACTTCCCAT CAACGTCGAT GATTTGCTGC GTCTGCAAGG CGTTGAGTCA GCGCGCGTCG AGTTCAAGGC ATCTTGGGAT GAGAAAACCA CGGGCTCCCA GATCATTCGG ACAATCTGCG CATTTGCAAA CGACTTCCAG AACTTGAACG GCGGTTACAT CGTCCTTGGT GTTGCTGAAC AGGACGGTGC CGCCGTCCTT CCTGCCAAAG GACTTTCTGA AAAAGAGATT GAAGACGCCC AGAAATGGAT ACGGGGACGC TGTAACGTCA TCGATCCGGT ATATCAGCCG GTACTCTCGC CAGAAATCCA TGAAGGGCAG CGGATTCTGG TGATCTGGGC GCCCGGCAGC CAAGCACGAC CACATCAGGC ACCAGAGTCT GTCGAAAAAG GTGCGTCCCG GAAGTTCTAC ATCCGGCTGG GATCGGAAAC GGTGGATGCC GACAGGCAGC CAGAGTTGAA AACCCAGCTC ATGCAACTGA CGGCGCGCGT GCCTTTTGAT GACCGGCGTG CGTTGCAGGC CAGCGTGCTT GATATTCGTG AAACCAAGGT GCGTGAGTTT TTGAATGACA TCGGTAGTGG TTTGGTGGAT GAAGCCGACA CCAAGACGCT TTACCGGGCG CTGCGTATTG CAGACCCCGT GAATGGGCAT GATGCCCCAC GCAATGTCGG GTTACTGTTT TTCAGCCAGA ACCCTGAACA GTGGTTTCCC GGTGCGCGGA TAGAGGTCGT GCAGTTCGCG GGAGACTCCA GTGGCAACAC GCTGGAAGAA AAGGTGTTCA GCAAGCGGCC TGTTCAGGAG CAGCTTCGGG AGTGCCTTGC CTATCTGGAG GGTTTGTCTG TCCGCATGAT CCAGAAACTG CCTGGGCGAA CCCAGGCGGG CCATTGGGTC AGCTACCCAT CGTTGGCTTT GCGCGAAGCT TTGGTGAATG CCGTCTATCA CCGTTCGTAT GAAGGCGTTC AGGAGCCGGT CAAGGTCTAT CTCTATCCAG ACCGGATGGA GATCATCAGC TATCCGGGGC CTGTACCGGG CGTTGAAATC AAGCATTTGG ATGGCTCTGC GCCTTTGCCA CCCGTACCCG CACGTAATCG CCGTATCGGG GAACTGCTGA AAGAGTTGCG GCTGGCTGAG GGGCGCGGCA CAGGCATCCC CAAGGTCAGG CGAACGATGG AACAGAATGG TTCCCCGCCA CCCCGGTTCG ATTTCGATGA GGCGAGGAGT TACTTCCGCG TCACACTGCC GGTGCATCCA GAGTATCAAG CGATTCTTGC GCTTCAGGAT GTCGCGCATT TGCGAGCTGT CGGCGATGTC CAGGGGACGC TACAGCGCCT GCAGGAGGCA TACAAGGCCA ATCCCGCCAC GCTGGGTGTG GCGGTTGAAT TGGCGAAGGA GTTGGTTTCC AAGGGAGATG TTCATGGCGC AGAAAATATC CACCAGCAGT TCAAGGCCAG CGCCCCAGCA GCAAACTCTG CGTCGCTGAT AACACTCATT GCTTCGGCGT GGCTTGATGC AGGTAAGCAG AAGGAGGCAG TTTCTTGGCT TAACAAACTG CCGCTACTGG ATGCTATTGG CGATGCCTTT GAGGCAGCGA TACAGGAGAA ACGCGCAGGT AGGTTTGAAA AAGCGCATCG CTATTTCCAG TTAGCCGGAG ATGCTGTTCT TCAGGATGTG AAGGCGCTTC ACGAGTTCGC TCAAGTCAAA ATGAAACTCG CGGATAAAGC TAGACCACGG CATCGTTCGG AGAGCCGGGT TGCGTACACC AAGCTGCTGG ATGAGGCCAG GGAAATGTTG CAGCGTGTAG TGCAGATGAA TGCTCCTCGT GCACGCCATG CATGGGCTTG GTATGACTTG GGGCGTGTGC TTCGCTGGAG CAAAGCAGCC TTGCCGGAAG TTCGCCGTGC CTTCGAGAAA GCTGTAGAGA ACGACCCCCA TGAGGACAGA TTCTCGCGGG CGTTGAAGGA GTTGGATGAT CGCAATGGCT GA
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Protein sequence | MSSILPINVD DLLRLQGVES ARVEFKASWD EKTTGSQIIR TICAFANDFQ NLNGGYIVLG VAEQDGAAVL PAKGLSEKEI EDAQKWIRGR CNVIDPVYQP VLSPEIHEGQ RILVIWAPGS QARPHQAPES VEKGASRKFY IRLGSETVDA DRQPELKTQL MQLTARVPFD DRRALQASVL DIRETKVREF LNDIGSGLVD EADTKTLYRA LRIADPVNGH DAPRNVGLLF FSQNPEQWFP GARIEVVQFA GDSSGNTLEE KVFSKRPVQE QLRECLAYLE GLSVRMIQKL PGRTQAGHWV SYPSLALREA LVNAVYHRSY EGVQEPVKVY LYPDRMEIIS YPGPVPGVEI KHLDGSAPLP PVPARNRRIG ELLKELRLAE GRGTGIPKVR RTMEQNGSPP PRFDFDEARS YFRVTLPVHP EYQAILALQD VAHLRAVGDV QGTLQRLQEA YKANPATLGV AVELAKELVS KGDVHGAENI HQQFKASAPA ANSASLITLI ASAWLDAGKQ KEAVSWLNKL PLLDAIGDAF EAAIQEKRAG RFEKAHRYFQ LAGDAVLQDV KALHEFAQVK MKLADKARPR HRSESRVAYT KLLDEAREML QRVVQMNAPR ARHAWAWYDL GRVLRWSKAA LPEVRRAFEK AVENDPHEDR FSRALKELDD RNG
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