Gene Veis_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0088 
Symbol 
ID4692587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp105237 
End bp106124 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID639847874 
Productpeptidase M23B 
Protein accessionYP_994899 
Protein GI121607092 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATGT TCGTATCGCG TGGTCTGGTG CTGGTGTGCG GCTTGGCAGT GGCGGCTTTG 
CTCTGCGGCT GCGGCACCCG ACTGCACAAG GCGCCGGTGG AGGACCGGGG AAGCTCCCTG
GCGCTGCAGC AACCGGCCAA GCCGCCGCCC CCGGGGGCCG AGAACGCGGG CAAGCCGGGC
TACTACACGG TCAAGCCGGG CGACATCCTG ATTCGCATCG GTCTGGAGAC GGGCCAGGGC
TGGAAGGACA TCGCCCGCTG GAACGACCTG GACAACCCCA ACCTGATCGA AGTCGGCCAG
GTGCTGCGCG TCGTGCCGCC CCTGCCGGTG GCGCCGGCGC CCGACAGCGG CGTGGTCACG
CGACCGGTGA CTTCCTCGAC GGTGGTGCCC ACGACGCCCG CCATGGCCCC CGCAGGCGCT
GCCTCCGCCA CGGCCCCCGC CGCGACGCCC GCTGCGGCCC CGGCCCCCGG CGCGACGATC
GTGGCAGCGG CCCCCGCCAC GCCGACCCCC GCAGCCGAAG ACGATCTGAG CCTGATCTGG
CCGGCGCAGG GCGCATTGAT CGCCGGCTTT CACGAGGTGC GCAACAAGGG CTATGACATC
GCCGGCAAGG CGGGCGATCC GGTGCTGGCG GCCGCAGATG GGCGCGTGGT GTATGCCGGA
TCGGCCATCC GCGGCTATGG CAATCTGATC ATCCTCAAGC ACAACAACAC CTTCCTGACG
GCATACGCGC ACAACCGCAG CTTGCAGGTG CAGGAGGAGC AGACCGTGCG CAAGGGGCAA
AAAATCGCCG AAATGGGCGA TACCGATGCA GACCGCGTCA AGCTGCACTT CGAGATCCGC
CGCAACGGCC GGCCGGTCGA CCCGTCGCGC TACCTGCCTG CCCGCTGA
 
Protein sequence
MLMFVSRGLV LVCGLAVAAL LCGCGTRLHK APVEDRGSSL ALQQPAKPPP PGAENAGKPG 
YYTVKPGDIL IRIGLETGQG WKDIARWNDL DNPNLIEVGQ VLRVVPPLPV APAPDSGVVT
RPVTSSTVVP TTPAMAPAGA ASATAPAATP AAAPAPGATI VAAAPATPTP AAEDDLSLIW
PAQGALIAGF HEVRNKGYDI AGKAGDPVLA AADGRVVYAG SAIRGYGNLI ILKHNNTFLT
AYAHNRSLQV QEEQTVRKGQ KIAEMGDTDA DRVKLHFEIR RNGRPVDPSR YLPAR