| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0080 |
|---|
| Symbol | ispG |
|---|
| ID | 4691866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 96793 |
|---|
| End bp | 98118 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639847866 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_994891 |
|---|
| Protein GI | 121607084 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA CCCGCGACCT CCTCGACACC ACTCCTGGCG CCTGCGATGC CCCCTGCCGC
GACGACGCGC CGGTGGCGAT CGCGGCCCCG TTGCCCCGTC GCGCGCGCCA GGCCACCCTG
GCCTGGGGGG CGCGGCTCGT CACCGTCGGT GGCGCGGCCC CGGTGCGCGT GCAGTCGATG
ACCAATACCG ACACCGTCGA TGCCATCGCC ACCGCGATCC AGGTCAAGGA ACTGGCGCAG
GCCGGCTCCG AATTGGTCCG GATCACGGTC AACACCCCGG AAGCCGCAGC GGCCGTGCCC
CATATCCGCG AGCAGCTCGA CAAGATGGGC GAGAGCGTGC CTTTGATCGG GGATTTCCAT
TACAACGGGC ACCGTTTGCT GACCGATTTT CCGGCCTGTG CCCAGGCCCT TTCCAAATAC
CGCATCAACC CGGGCAACGT GGGCCGGGGC GACAAGCACG ACAAGCAGTT CGGTCAGATG
ATCGATGCCG CGCTGCGCTG GAACAAGGCG GTGCGCATCG GTGTCAATTG GGGCAGCCTG
GACCAGGATT TGCTGGCCGA TCTGATGGAT GCCAACAGCC GCCGCAGCGT GCCATGGCAA
CTGCGCCAGG TGATGTACGA GGCGCTGATC AGCTCGGCGA TCGGGTCTGC GCGCCGGGCC
GAGGCGATGG GCCTCGATGG CGACCAGATC ATCCTGTCGT GCAAGCTCAG CGGGGTTCAG
GACCTGATCG CCGTGTACCG CGCATTGGCG CGCCGCTGCG ACTACGCGCT GCATCTGGGG
CTGACCGAAG CCGGCATGGC GACCAAGGGA ACCGTGGCCT CGACGGCCGC ATTGGCGGTG
CTGCTGCAAG AGGGGATAGG CGACACCATC CGCGTGTCCT TGACCCCTCA GCCCGGGCAG
GCGCGCGCGC AGGAGGTGCT GGTCGCCACT GAAATCCTGC AAGCGCTGGG CCTGCGCGCC
TTTGTGCCCA GCGTCACGGC CTGCCCCGGC TGCGGCCGCA CCACGAGCAC CCTGTTCCAG
GACCTGGCCA AGCAGATCGA TGACTTTTTG CGTGACCGGA TGCCGGTGTG GCGGCTGCGT
TATCCGGGCG TGGAAAACCT GCGCGTGGCC GTGATGGGCT GCATCGTCAA TGGTCCGGGC
GAGAGCCGGC ATGCGGATAT CGGCATCAGC CTGCCAGGCA CCGGGGAGGC GCCGGCGGCG
CCGGTCTTCA TCGACGGGCA AAAGGCCATG ACCCTGCGCG GAGATAATAT CGCCAGCGAA
TTTCATCAAC TCGTCGAGCG CTACATCGAA AAACGCTTTG GCGCAATGGC TGCGCCCACC
GTTTGA
|
|---|
| Protein sequence | MANTRDLLDT TPGACDAPCR DDAPVAIAAP LPRRARQATL AWGARLVTVG GAAPVRVQSM
TNTDTVDAIA TAIQVKELAQ AGSELVRITV NTPEAAAAVP HIREQLDKMG ESVPLIGDFH
YNGHRLLTDF PACAQALSKY RINPGNVGRG DKHDKQFGQM IDAALRWNKA VRIGVNWGSL
DQDLLADLMD ANSRRSVPWQ LRQVMYEALI SSAIGSARRA EAMGLDGDQI ILSCKLSGVQ
DLIAVYRALA RRCDYALHLG LTEAGMATKG TVASTAALAV LLQEGIGDTI RVSLTPQPGQ
ARAQEVLVAT EILQALGLRA FVPSVTACPG CGRTTSTLFQ DLAKQIDDFL RDRMPVWRLR
YPGVENLRVA VMGCIVNGPG ESRHADIGIS LPGTGEAPAA PVFIDGQKAM TLRGDNIASE
FHQLVERYIE KRFGAMAAPT V
|
|---|
| |