Gene Veis_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0072 
Symbol 
ID4693298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp88183 
End bp89091 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID639847858 
ProductHflC protein 
Protein accessionYP_994883 
Protein GI121607076 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.055112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGAG TCGGACTTAT TGCCTCCACC GTCCTGGTGG CATTGGCGCT GATGAACTCC 
ATGCTTTTCG TCGTCGATCA GCGCCAGTTT GGCGTTCTTT ATGCGCTGGG ACAGATCAAG
GACGTGATTA CCGAGCCGGG CCTGAACTTC AAGCTGCCGC CGCCTTTCCA GAACGTGACC
TACATCGACA AACGCCTGCT GACCTTGGAC AGCACGGACA CCGAGCCGAT GCTGACCGCT
GAAAAGCAGC GGGTCGTGAT CGACTGGTAT GTGCGCTGGC GCATCTCTGA ACCGACGGCA
TATATCCGCA ACGTGGGCCA GGATGAAAGC GCCGGCGCGA TGCAGCTCAA CCGCGTGGTG
CGCAATGCCT TCCAGGAGGA GATCAACAAG CGCACGGTCA AAGAGTTGCT TTCGCTCAAG
CGCGAGGCAT TGATGGCCGA TGTGAAGCGC GAAGTGCTCG AAGCCGTCCG CGGCGTCAAA
CCCTGGGGCG TGGACGTGGT TGACGTGCGC ATCACCCGCG TCGACTACGT GGAGGCCATT
ACCGAATCCG TGTACCGCCG CATGGAGGCC GAACGCAAGC GGGTGGCCAA CGAACTACGC
TCCACCGGGG CTGCCGAGGG CGAAAAAATC CGGGCCGACG CCGACCGTCA GCGCGAAATC
ACGATCGCCA ACGCCTACCG CGACGCACAA AAGAGCAAGG GCGAGGGCGA CGCGCAAGCG
GCCCGCATCT ACGCCGAAGC CTTCGGCCGC GACCCGCAGT TCGCCCAGTT CTATCGCAGC
CTGGAAGCCT ACAAGGCGAG CTTCAATAAA AAAAGCGATG TGCTGGTGGT CGACCCTTCG
TCGTCAGATT TCTTCAAAGC CTTCCAGGGC CATGCGCCAG CGGCTGCCCA GCCGGGTGCG
CGCAAGTAA
 
Protein sequence
MNRVGLIAST VLVALALMNS MLFVVDQRQF GVLYALGQIK DVITEPGLNF KLPPPFQNVT 
YIDKRLLTLD STDTEPMLTA EKQRVVIDWY VRWRISEPTA YIRNVGQDES AGAMQLNRVV
RNAFQEEINK RTVKELLSLK REALMADVKR EVLEAVRGVK PWGVDVVDVR ITRVDYVEAI
TESVYRRMEA ERKRVANELR STGAAEGEKI RADADRQREI TIANAYRDAQ KSKGEGDAQA
ARIYAEAFGR DPQFAQFYRS LEAYKASFNK KSDVLVVDPS SSDFFKAFQG HAPAAAQPGA
RK