| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0064 |
|---|
| Symbol | |
|---|
| ID | 4690464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 78013 |
|---|
| End bp | 78945 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639847850 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_994875 |
|---|
| Protein GI | 121607068 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC TACTGATGGC CGTGGTGACG GCCACCGCCG CACTGGCCGC GCCGCTGGCC
AGCGCGCAGA AGATCGGCGT GACCATGTCA CAGTTCGACG ACAACTTTCT GACCATCCTG
CGCAACAGCA TGGCCGACTC GGCCAGGAAA GCCGGCGTCA GCGTACAGAT CGAGGACGCC
GGCGGCGATG TCGGCAAGCA GCTCAGTCAG ATCCAGAACA TGATCGCGCA GAAAGTGGAC
GCGGTCATCG TCAACACCGT GGACACCGAC GCCACGCCGA AAATGACCCG CCTGCTGACC
GAGGCCGGGA TTGCGCTGGT CTACGTGAAC CGCAAGCCGG TGGACTTCGA GAAACTGCCG
CCCGGCATGG CCGTGGTCGC GTCCGACGAG ACGGTGTCGG GCAAGTTGCA GGCCGAGCAG
GTGTGCAAAC TGCTCGGCGG CAAGGGCAGC ATCCTGGTGC TGATGGGCGA TTTGTCGAAC
GAGGCTGCGC GCTCGCGCAC CAAGGCGGTC GAGGATGTGC TGGCGGGCAA GGAATGCTCG
GGCATCAAGA TTGCCGACAA GCGCGAGGGC AAGTGGGACC GCACCCGGGG CCAGGACATC
GCCACCAACT GGCTCAGTTC GGGGCTGAAG TTCGACGCCA TCGTCTCGAA CAACGACGAG
ATGGCCCTCG GCGCGATCAA CGCGCTCAAG GCCACCAAGA AGTGGACGCC CCAGACCATC
GTTGCCGGCA TCGATGCCAC GCCCGATGCG CTGGCGTCGA TGAAGGCCGG CGACCTGAAG
GTCTCGGTTT TCCAGAACGC CGTCGGGCAG GGCGCAGGCG CGATCGATGC GGCGATCAAA
CTGGCCAGGA AGCAGCACCA GGAGCGCTTC GTCAGCATAC CGTTCGAGCT GGTCACGCCC
GAGAACATGG CCCGGTACGC CGGCAAAAAC TGA
|
|---|
| Protein sequence | MKTLLMAVVT ATAALAAPLA SAQKIGVTMS QFDDNFLTIL RNSMADSARK AGVSVQIEDA
GGDVGKQLSQ IQNMIAQKVD AVIVNTVDTD ATPKMTRLLT EAGIALVYVN RKPVDFEKLP
PGMAVVASDE TVSGKLQAEQ VCKLLGGKGS ILVLMGDLSN EAARSRTKAV EDVLAGKECS
GIKIADKREG KWDRTRGQDI ATNWLSSGLK FDAIVSNNDE MALGAINALK ATKKWTPQTI
VAGIDATPDA LASMKAGDLK VSVFQNAVGQ GAGAIDAAIK LARKQHQERF VSIPFELVTP
ENMARYAGKN
|
|---|
| |