| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0054 |
|---|
| Symbol | |
|---|
| ID | 4691629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 67147 |
|---|
| End bp | 68076 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639847840 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_994865 |
|---|
| Protein GI | 121607058 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAATAC GCCTGCTCCC CGTGGCGGTC GTCTGTGCCT GTCTGTGGCT CGCGCCGGCG
GCACAGGCCC AGCGCATTGC CGTGTCCGTT GCCAACACCG GCCCCTGGCT GTCGCTGGTC
AGTCGCGGCA TGAGCACCTA TGCGGCCAGC CAGAAAGGGC TGGATCTGAA ACTGCACGAC
GCGCAGGACG ACATCGCGCG CCAGCTCAAC CAGATCCAGA ACTTCATTGC CCAAAAGGTC
GACGCCATCA TCGTCGTGAC CGTAGACACC CAGGCGACCC CGAGGATGAC CCAACTGGCC
AGCGCCGCCG GCATCCCGCT GGTGTATGTG AACCATCCGC CGGCCGAGGG CAAGCTGCCA
CCCAAGGTGG TGTTCGTCGG CTCCGACGAG GCCGACTCGG GCACCCTGCA AACCCGCGAG
GTCTGCCGGC TGCTCGGCGG CAAGGGCCGC GTGGCGGTGA TGATCGGCGA CCTGTCGAAC
CAGTCGGCCA TCCAGCGCAC GCAGGATGTC AGGGAGGTGA TCGCCAAGCC GCCATGCCAG
GCCATAAAGA TCGTGGCCGA GCAATCTGCC GACTGGAGCC GCGTCAAAGG CGCAAACCTG
ATGACCAACT GGATCACCGC CGGCATTCCG GTCGATGCCG TGATCGCCAA CAACGACGAG
ATGGCGATCG GCGCGATACA GGCGCTCAAG GCCGCGCGCA AGCTCGATAC GGTCGTGGTC
GCCGGCATCG ATGCCACGCA GGACGCGCTG GCGGCGATGA AGGCCGGCGA GTTGAAGGTG
ACCGTGTTCC AGGACGCCAT CGGGCAGGGT CGGGGTGCGG TCGATGCCGC CCTGAAGCTC
ATCCGGGGCC AGCCCGTGCC GTCGAAGCTG TGGGTGCCGT TCGAGTTGGT GACCCCCGCC
AACATCGACA AATACCTGGG CAAGAACTGA
|
|---|
| Protein sequence | MRIRLLPVAV VCACLWLAPA AQAQRIAVSV ANTGPWLSLV SRGMSTYAAS QKGLDLKLHD
AQDDIARQLN QIQNFIAQKV DAIIVVTVDT QATPRMTQLA SAAGIPLVYV NHPPAEGKLP
PKVVFVGSDE ADSGTLQTRE VCRLLGGKGR VAVMIGDLSN QSAIQRTQDV REVIAKPPCQ
AIKIVAEQSA DWSRVKGANL MTNWITAGIP VDAVIANNDE MAIGAIQALK AARKLDTVVV
AGIDATQDAL AAMKAGELKV TVFQDAIGQG RGAVDAALKL IRGQPVPSKL WVPFELVTPA
NIDKYLGKN
|
|---|
| |