| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0048 |
|---|
| Symbol | |
|---|
| ID | 4691908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 60776 |
|---|
| End bp | 61525 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639847834 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_994859 |
|---|
| Protein GI | 121607052 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACACC CGCGCATTGC AAGCGTCGTC GCCGTCGAGC CGCATCCCGA CGATGTGGAG
ATTCTCTGCC TGGGCACCTT GTTGAAACTC AAGCAAGAAG GCACCCGGCT GACCATCGTG
TGCGTGACGA ATGGCGACAA GGGGTCGGGC AACCAGCCTG ATCTTCCCTA CCCGGAAGTT
GCCGCGATGC GCTTTCGCGA GGCGTCCTCG GTGGCGGCGG CGCTCGGCGC GGAGTTCATC
AATCTGGGCG CGGAAGACGA GTATCTCTAC GACACCCCCG AACTGCGCAA TGCGCTGGCC
GCCGTGTTTC GCCGCGCCAA GGCCGATGTG GTGCTGGCGC CCTCGCCCCA TTGCTACCAG
ACCGACCACA CCATTGCCTC CGAAATCGCA TTCCAGGCGG CGCATCTGTC GGCCCTGCCG
CAACTGCGCA TCACGCCGCC CGCACTGCCC GCGCTGCCCG CACTGCCAAG TGCGCCGGCA
ATGTACTACT ACGACACCCT CCCCGGCCTC GACTTCGAGC CCTCCTTTTA TGTCGACATC
TCCGGCCAGA TGGCGCGCAA GCAGGAACTG GCGCGCATGC ACACGAGCCA GATGGCCAGC
ATGAAATCGC AGTCCGACTG GGACCTGGTC GAAGCCATTG AAGTGCTCGG GCGCATGCGC
GGCCTGCAAA GCGGCACGCG CTACGCAGAA GCCTTCCGCC TTTGTGCCCG CTACCCGCGG
CTGAAGGCGT GGACGCAATT TCCGGCCTGA
|
|---|
| Protein sequence | MPHPRIASVV AVEPHPDDVE ILCLGTLLKL KQEGTRLTIV CVTNGDKGSG NQPDLPYPEV
AAMRFREASS VAAALGAEFI NLGAEDEYLY DTPELRNALA AVFRRAKADV VLAPSPHCYQ
TDHTIASEIA FQAAHLSALP QLRITPPALP ALPALPSAPA MYYYDTLPGL DFEPSFYVDI
SGQMARKQEL ARMHTSQMAS MKSQSDWDLV EAIEVLGRMR GLQSGTRYAE AFRLCARYPR
LKAWTQFPA
|
|---|
| |