Gene Veis_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0041 
Symbol 
ID4690291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp53068 
End bp53577 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID639847827 
Productpreprotein translocase subunit SecB 
Protein accessionYP_994852 
Protein GI121607045 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.815394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCCGGC GGGTTTCGTT TTGCTGCAAC CCAAGCCAAG AGACTGTCAC CATGGCCGAC 
CAAGACAATC CCGTGTTCCA GATTCAGCGG GTCTACCTCA AAGACCTGTC GCTGGAACAG
CCCAACTCGC CCGCCATCTT GTTGGAGCAA GAGCAGCCCA ATCTCGACAT ACAGCTTGGT
GTGGAAGCCA CCCCGGTGGG CGAAGGCTTT TTTGAAGTGG CCGTGACCGC CACGGTGCAG
ACCAAGATCA AGGACAAGAC CATGTTCCTG GTCGAGGCCA AGCAGGCCGC GATCTTCGAG
ATCCGCAATG TGCCCGAGGA CCAGATGGGC CAGATCATGG GCGTCGTCTG CCCGCAGATC
GTCTACCCCT ACCTGCGCGG CAATGTGGCC GACGTGATCA ACCGCGCCGG CTTCCCGCCG
GTGCACCTGG GCGAGATCAA CTTCCAGGGC ATGTATGAGC AGCAGCAGGC GCAAGCTGCG
GGCGCGGCTG CGCCGGTGAC CACGCAGTAA
 
Protein sequence
MPRRVSFCCN PSQETVTMAD QDNPVFQIQR VYLKDLSLEQ PNSPAILLEQ EQPNLDIQLG 
VEATPVGEGF FEVAVTATVQ TKIKDKTMFL VEAKQAAIFE IRNVPEDQMG QIMGVVCPQI
VYPYLRGNVA DVINRAGFPP VHLGEINFQG MYEQQQAQAA GAAAPVTTQ