| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0023 |
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| Symbol | |
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| ID | 4691091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 33001 |
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| End bp | 35400 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639847809 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_994834 |
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| Protein GI | 121607027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.432475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGC CCCCCCCAGC GAAGTCCTCC GCCAAGTCGG ACACCCCCCC CGTTCGTGCC
CGGCCGACCT GGTCGCGCCA GGTCCTGCGC ATCAGCGGGT GGCTGCTCGG ATTGACCGCC
GCCGCTGTCG CAGGGCTGGC GTTGACGATC GCCGTGGCGC TGTCGGCGGC CTACCCCAAT
CTGCCGGACA TATCGGAGCT TGCGGACTAC CGTCCCAAGC TGCCTTTGCG GGTGTACTCG
GCGGAAGGGG CGTTGCTGGG CGAATTCGGG GAAGAGCGGC GCAATCTGAC GCCCATCGCC
GAGATCCCGA AGGTCATGAA GGACGCCGTC CTGGCGGTCG AAGACGCGCG GTTTTTTCAG
CACGGCGGCA TCGACTACAA AGGTGTGCTG CGTGCCGGTC TGGCCAATGT CGGACGCCTG
GGGAGCCAGG GCGCTTCGAC GATCACGATG CAGGTGGCGC GCAATGTTTA TTTGTCGTCG
GAGAAAACGT TCACACGCAA GATTTATGAA GTATTACTGA CTTTGAAGTT GGAAAATTTG
CTGACCAAGG ATCAGATTCT TGAGATCTAC ATGAATCAGA TTTACCTGGG CAATCGCGCC
TATGGTTTTG CTGCGGCCTC CGAAGCCTAT TTCGGCACGC CGCTGAAGTC CTTGTCGATT
GCGCAAGCGG CCATGCTTGC GGGCTTGCCC AAGGCGCCCT CGGCCTACAA CCCGATCAGC
AACCCCAAGC GGGCCCGCGT GCGCCAGCAG TACATCATCG AGCGCATGCG GGAAAACGGC
TTCATCACGC CGCAGCAAGC GACCGAGGCC AAGCAGGAGG ACCTCAAGAT TCGCACAGGC
CCGGACAACA CCCGGATACA TGCCGAGTAT GTGGCCGAAA TGGTGCGGCA ACTGATCTTC
ATCCAGTATG GCAACGAGGC CTACACACGC GGGCTCAATG TCTACACCAG CCTCAATGCC
GTGCAGCAAG AGACCGCTTA CAACGCCTTG CGCCGCGGGA TCATGGATTA CGAACGGCGC
CAGCAGTATC GCGGGCCGGA GCGGTTTGTC GCGCTGCCGG CCGCGCAGCA GGAGATGGAG
GACGCGATTG ACGACGCCTT GGCCAACCAT CCCGACAACG GGGATCTGCT CGCTGCCGTG
GTGCTGGCGG CCGCTCCGAA CAAGATCGTT GCCGCGCGTG CCACTGGCGA CCAGATCGAG
ATCACCGGCG ACGGCCTGAA GCCGGCGCAG TCGGGGCTGA GCGACAAGGC GCCGCCGAAC
ATCAGGATCC GCCCTGGCGC CGTGATACGG GTGCTCAAGA CGCCCAAAAA CACCTGGGAA
ATCACGCAAT TGCCGGAGGT GGAAGGCGCC CTGGTGGCGC TCGATCCGCG CAACGGCTCG
ATTCGGGCCT TGGTCGGGGG CTTCGACTTC AATAAAAACA AATTCAACCA TGCGACGCAA
GCCTGGCGCC AGCCAGGATC GAGCTTCAAG CCGTTCATCT ACTCGGCAGC CCTGGAGAAG
GGGTTTACGC CCGCCACGGT CATCAACGAC GCGCCTTTGT TCTTTGGCGC GGGCGTCACC
GGCGGCCAGC CCTGGGAGCC GAAAAACTAC GACGGCAAAT ACGACGGGCC GATGAGCATG
CGCACCGGGC TGGCCAAGTC CAAGAACATG GTCTCGATCC GCATCCTGCA GGCCATAGGC
CCGAAGACGG CGCAAGATTG GGTGGGGCGC TTTGGCTTCG ATGTCGAGAA ACACCCGGCT
TACCTGCCGA TGGCGTTGGG GACGGGTTCC GTGACGCCGC TGCAACTGGC CTCGGCCTAT
TGCGTGTTTG CCAACGGCGG CTATCGCGTC AACCCCTGGT TGATCACCAA GGTCACGGAC
CACAAAGGGC GGGTGATTTC CGAACCCCCG CCTCCGGTCA GCGGCGAGCA GTCCCGCGCC
ATCGCTGCGC GCAACGCCTT TGTCATGGAC AGCCTGCTGC AGGAGGTGAC CCGCTCCGGG
ACCGCCGCCA AGGCCCAGGC CACCCTCAAG CGCCCGGACA TCTACGGCAA GACCGGCACC
ACCAACGACT CGGTCGATGC CTGGTTTGCC GGCTTCCAAC CCACCATTGC GGCGGTCACA
TGGATTGGCT ACGACACCCC GCGCAATCTG GGCAGCCGCG AGACGGGCGG CGGGCTCAGC
CTGCCGATAT GGATCAGTTT CATGGAGCGC GCGCTCAGGG GCGTCCCGGT GCAGGAGCCC
GACGTGCCGG CAGGGGTCGT GAATGTGGGC GGGGAATGGT TCTATGAGGA ATACGCCCAC
AACGCGGGCG TTGCCAGCGT CGGGCTGGAG GCGGGGGGCG TTGCCGCACC CGCCGCAGTG
CCCCAGGCGC CGCCGCCATC GGAGGAGCGC AACCGGATTC TCGACCTGTT TCGCCACTGA
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| Protein sequence | MPQPPPAKSS AKSDTPPVRA RPTWSRQVLR ISGWLLGLTA AAVAGLALTI AVALSAAYPN
LPDISELADY RPKLPLRVYS AEGALLGEFG EERRNLTPIA EIPKVMKDAV LAVEDARFFQ
HGGIDYKGVL RAGLANVGRL GSQGASTITM QVARNVYLSS EKTFTRKIYE VLLTLKLENL
LTKDQILEIY MNQIYLGNRA YGFAAASEAY FGTPLKSLSI AQAAMLAGLP KAPSAYNPIS
NPKRARVRQQ YIIERMRENG FITPQQATEA KQEDLKIRTG PDNTRIHAEY VAEMVRQLIF
IQYGNEAYTR GLNVYTSLNA VQQETAYNAL RRGIMDYERR QQYRGPERFV ALPAAQQEME
DAIDDALANH PDNGDLLAAV VLAAAPNKIV AARATGDQIE ITGDGLKPAQ SGLSDKAPPN
IRIRPGAVIR VLKTPKNTWE ITQLPEVEGA LVALDPRNGS IRALVGGFDF NKNKFNHATQ
AWRQPGSSFK PFIYSAALEK GFTPATVIND APLFFGAGVT GGQPWEPKNY DGKYDGPMSM
RTGLAKSKNM VSIRILQAIG PKTAQDWVGR FGFDVEKHPA YLPMALGTGS VTPLQLASAY
CVFANGGYRV NPWLITKVTD HKGRVISEPP PPVSGEQSRA IAARNAFVMD SLLQEVTRSG
TAAKAQATLK RPDIYGKTGT TNDSVDAWFA GFQPTIAAVT WIGYDTPRNL GSRETGGGLS
LPIWISFMER ALRGVPVQEP DVPAGVVNVG GEWFYEEYAH NAGVASVGLE AGGVAAPAAV
PQAPPPSEER NRILDLFRH
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