Gene Veis_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0013 
SymbolaroK 
ID4693302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp20727 
End bp21254 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID639847799 
Productshikimate kinase 
Protein accessionYP_994824 
Protein GI121607017 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.668155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTC GCTGTGCACT GGTCGGCATG CCCGGCGCGG GCAAATCCAC CGTTGGCCAG 
CGGCTGGCCG ACCGGGTCGG GGTGCCGTTC ATCGATCTGG ACCAATGGCT CGAACAGGCC
ATCGGCAGCA GCATCCGCAG CTACTTCGAA GCGCAAGGCG AAGAGCGCTT TCGCGACCTG
GAGTCGCAGG GGCTGGCCGA GGTGGCGCGC CAGCCCGGCG GCCTGGTGCT GGCCACCGGC
GGCGGCGCCG TGCTGCGCGC GCCAAACCGC GCCGTGCTGC GCCAGTTCGG GCATGTGCTG
TACCTGTGGG CCATGCCCGA AGACCTCTAC CAGCGCGTCA AGCACGACCA GACCCGTCCG
CTGCTGCAAA CGGACGACCC GCTACGGCGG CTGCGCCAGT TGTACGCCGA GCGCGACCCG
CTGTACCGCG CAACCGCCCG GTGCGTGATC CAGACCGGGC AGGCTGCGGT GGGCACGCTG
GTCGACTGCA TCATGCGGCA GTTGGAGCTG GCGCCGCCGC CGCCGTAG
 
Protein sequence
MQIRCALVGM PGAGKSTVGQ RLADRVGVPF IDLDQWLEQA IGSSIRSYFE AQGEERFRDL 
ESQGLAEVAR QPGGLVLATG GGAVLRAPNR AVLRQFGHVL YLWAMPEDLY QRVKHDQTRP
LLQTDDPLRR LRQLYAERDP LYRATARCVI QTGQAAVGTL VDCIMRQLEL APPPP