Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0013 |
Symbol | aroK |
ID | 4693302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 20727 |
End bp | 21254 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639847799 |
Product | shikimate kinase |
Protein accession | YP_994824 |
Protein GI | 121607017 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.668155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTC GCTGTGCACT GGTCGGCATG CCCGGCGCGG GCAAATCCAC CGTTGGCCAG CGGCTGGCCG ACCGGGTCGG GGTGCCGTTC ATCGATCTGG ACCAATGGCT CGAACAGGCC ATCGGCAGCA GCATCCGCAG CTACTTCGAA GCGCAAGGCG AAGAGCGCTT TCGCGACCTG GAGTCGCAGG GGCTGGCCGA GGTGGCGCGC CAGCCCGGCG GCCTGGTGCT GGCCACCGGC GGCGGCGCCG TGCTGCGCGC GCCAAACCGC GCCGTGCTGC GCCAGTTCGG GCATGTGCTG TACCTGTGGG CCATGCCCGA AGACCTCTAC CAGCGCGTCA AGCACGACCA GACCCGTCCG CTGCTGCAAA CGGACGACCC GCTACGGCGG CTGCGCCAGT TGTACGCCGA GCGCGACCCG CTGTACCGCG CAACCGCCCG GTGCGTGATC CAGACCGGGC AGGCTGCGGT GGGCACGCTG GTCGACTGCA TCATGCGGCA GTTGGAGCTG GCGCCGCCGC CGCCGTAG
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Protein sequence | MQIRCALVGM PGAGKSTVGQ RLADRVGVPF IDLDQWLEQA IGSSIRSYFE AQGEERFRDL ESQGLAEVAR QPGGLVLATG GGAVLRAPNR AVLRQFGHVL YLWAMPEDLY QRVKHDQTRP LLQTDDPLRR LRQLYAERDP LYRATARCVI QTGQAAVGTL VDCIMRQLEL APPPP
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