Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0010 |
Symbol | hemE |
ID | 4692880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 15099 |
End bp | 16211 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639847796 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_994821 |
Protein GI | 121607014 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.717373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTTG CCCCCCTCGC CAACGACAGT TTCCTGCGCG CCTGCCGCCG CCAGGCCACC GACTACACCC CCCTGTGGCT GATGCGCCAG GCGGGCCGCT ACCTGCCCGA ATACCAGGCC AGCCGGGCGC GGGCCGGCAG CTTCATGGGC CTGGCGACCA GCGTGGACTA CGCCACCGAG GTGACGCTGC AACCGCTGGA GCGCTTCCCG CTGGACGCGG CCATCCTGTT CAGCGACATC CTTACCGTGC CGGACGCGAT GGGCCTGGGC CTGTCGTTTG CCGAGGGCGA AGGCCCGCGC CTGGCCAAGG TGGTGCGCGA CGAGGCCACC GTGGCCGCGC TGGCCGTGCC CGACATGGCC CGGCTGCGCT ACGTGTTCGA TGCCGTGGCC AGCATCCGCC GGGCGCTGAA CGGGCGCGTG CCGCTGATCG GTTTTTCCGG CAGCCCCTGG ACGCTGGCCT GCTACATGGT CGAAGGCCGG GGCAGCGACG ACTACCGGCT GGTCAAGGGC CTGATGTATT CCCGCCCCGA CCTGATGCAC CGCATCCTGG CCATCAACGC CGACACGGTG GCGGCCTATC TGAACGCCCA GATCGACGCC GGCGCCCAGG CCGTGATGGT CTTCGACAGT TGGGGCGGCG TGCTCGCCGA CGGCGCCTTT CAGGCATTCA GCCTGGCCTA CACCGCCCGC GTGCTGGCGC AATTGCAGCG CACCGGGGTG GATGGCAGCG ATGTGCCGCG CATCGTCTTC ACCAAGGGCG GCGCGCCGTG GCTGCAAGAC ATGCAGTCGC TGGACTGCCA GGTGCTGGGC CTGGACTGGA CGGCCAACCT GGCCAGCGCG CGGGCCTTGG TCGGCGGCGC CGTGGGCGGC CCGGGCAAGG CGTTGCAGGG CAACATCGAC CCCCATGTGC TGCTGGCCCC GCCGGCGCGC ATCGTGCAGC AGGTGCAGCA GGTGCTCGAC AGCTTTGGCC CGCCCCACAC CGACCGCAGC ACCACCGGGC CTACGCATAT CTTCAACCTG GGCCACGGCA TCAGCCAGTT CACGCCGCCG GCGCATGTGG CAGCACTGGT CGAGGCCGTG CACAGCTACT CGCGGGCGCA GCGCCAGGGC TGA
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Protein sequence | MPFAPLANDS FLRACRRQAT DYTPLWLMRQ AGRYLPEYQA SRARAGSFMG LATSVDYATE VTLQPLERFP LDAAILFSDI LTVPDAMGLG LSFAEGEGPR LAKVVRDEAT VAALAVPDMA RLRYVFDAVA SIRRALNGRV PLIGFSGSPW TLACYMVEGR GSDDYRLVKG LMYSRPDLMH RILAINADTV AAYLNAQIDA GAQAVMVFDS WGGVLADGAF QAFSLAYTAR VLAQLQRTGV DGSDVPRIVF TKGGAPWLQD MQSLDCQVLG LDWTANLASA RALVGGAVGG PGKALQGNID PHVLLAPPAR IVQQVQQVLD SFGPPHTDRS TTGPTHIFNL GHGISQFTPP AHVAALVEAV HSYSRAQRQG
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