| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6365 |
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| Symbol | |
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| ID | 7975687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1114074 |
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| End bp | 1115078 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796932 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_002948191 |
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| Protein GI | 239821006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.100526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAG TGCTTTCCTC GGCCGCGCTC GCCACCGTGC AGGACCTGGG GCGCACCGGC
AGCCTGCGCT GGGGCGTCGG CACCTCGGGC GCCATGGACA ACCTGGCGCT CGCGGCCGGC
AACCTGCTGC TGGGCAATGC GCCGGGTGCA GCGGCCATCG AAGTGCCGGT GTTTCCGTTC
AAGGTGCGCT TCGGCGAGGA CTGCGCCTTC GCGCTGACCG GCGCCGATTG CGCGGCCCGG
CTGGACGACC AGCCGCTGCT GCCCTGGTGG GTTCACCAGG CGCGGGCCGG GCAGGTGCTG
GCGCTGGGCC TGCCGCAAGG CGGCGCGCAG CAGCGCGGCA GCCGCGCCAT GCTGTGCCTG
GCCGGCGGGG TCGACGTGCC CGAGGTGCTG GGCTCGCGCA GCACGCAGCT GCGCGGCGCC
TTTGGCGGCC ATGAAGGGCG TGCGCTGCGG CGGGGCGACG TGCTGCGCGC GGCAGGCTTG
GGCACTGCGC GCAAGACCGG CTTCGGCCTC GTGCCGCCCG CGCTCGCATT GCCGCTGCAG
CAGGACAGCG TGGCGGCCGT GCGCGTCCTG CCCGCGGCCG AGTACATGGC GTTCGAGCCC
GCGTCGCGCG ACGCCTTCTG GGCCGGCGAA TGGAAGATCA CTGCGCAGAG CGACCGCTAC
GGCTACCGAT TGGAGGGCGA GGCGCTGCGC CCCATCGCAC CGATGGAGCT GCGCTCGCAC
GGCATCGTGC CCGGCGTGAT CCAGGTGCCG CACAGCGGGC AGCCGATCAT CCAGATGCGA
GATGCCCAGC CCTCGGGCGG CTACCCCAAG TTCGGCACGG TGATCGAAGC CGACATGTGG
CGCCTCGGCC AGGCGCCGAT CGGCAGCCGC GTGCGCTTCA TCGAAACCAC ATGGGACGAA
GCGCTGGCCG CGCTCGACGA AGTGCGCGCC TGGCTCGACA AGGTGGCACG CATGGTGGAA
CTGCACCGCG GTGCGCCTGT TTCCGTAGCG AGGCAACCGG GATGA
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| Protein sequence | MIEVLSSAAL ATVQDLGRTG SLRWGVGTSG AMDNLALAAG NLLLGNAPGA AAIEVPVFPF
KVRFGEDCAF ALTGADCAAR LDDQPLLPWW VHQARAGQVL ALGLPQGGAQ QRGSRAMLCL
AGGVDVPEVL GSRSTQLRGA FGGHEGRALR RGDVLRAAGL GTARKTGFGL VPPALALPLQ
QDSVAAVRVL PAAEYMAFEP ASRDAFWAGE WKITAQSDRY GYRLEGEALR PIAPMELRSH
GIVPGVIQVP HSGQPIIQMR DAQPSGGYPK FGTVIEADMW RLGQAPIGSR VRFIETTWDE
ALAALDEVRA WLDKVARMVE LHRGAPVSVA RQPG
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