| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6278 |
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| Symbol | |
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| ID | 7975494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1015090 |
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| End bp | 1016058 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796848 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948107 |
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| Protein GI | 239820922 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000130922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCT TCCTGAACGC CGCCCTGCTC GCGACCGCGG CCCTCGCCGC ACCGCTCGCC
GTCCATGCCC AGGCGTGGCC CGCCAAGCCG GTCAAGATCG TCGTGCCCTC GCCGCCCGGC
GGCAGCACCG ACCAGATCGC CCGCACCATC GGCCAGAAGC TGTCGCAGGC GTGGGGCCAG
CCGGTAGTGG TGGAGAACCG GCCCGGCGCC GGCCTCACGC TGGGCGCCGA CTATGTGGCC
AAGTCGCCGG CCGACGGCTA CACGCTGCTG ATGGGTGCGG TGCACCACTC GATCGCGCAG
TCGGTCTACA AGAAGCTGCC CTACGATTTC GGCAAGGACC TGGCGCCGAT CACCGTGCTG
GCCATCGTGC CCAACGTGCT GATCGTGTCG GCCGCCAATC CCGCGAAGAA CGTGGCCGAG
CTTATCGCGC AAGCCAAGGC GAACCCCGGC AAGCTCAGCT ACGGCAGCAC CGGTGCCGGC
ACCGCGCACC ACCTCATCGG CGAGCAGTTC AACGACATGG CCGGCACCGA CATCCTGCAC
GTCGCCTACA AGGGCAGCAG CCCGGCGCTG GTCGACCTCA TGGGCGGACA GACGACGATG
ATGTTCGACA CGGTGGCCTC CTGCTTGCCG CTCATCAAGG GCGGCAAGCT GCGCCCGCTG
GCGGTGGCCA CGGCCAGACG CTCGTCGGCA CTGCCCGAGG TGCCGACGCT GTCGGAAGCG
GGCCTCACCG GTTTCGACAT CGCGACCTGG TTCGGTCTGA TGGCGCCGGC CGGCACGCCC
AAGGCCGTGG TCGACAAGAT CCACGCCGAT TCCACCCGAA TCCTCGCGAT GCCCGAGATG
AAGAAGCAAT GGCTGGAGAT GGGCGCGGAG CCGATCGGCA ACACGCCCGA GCAGATGGCC
GCTCAGATAC AGGCGGAGAT CGCGAAATTC GCGGCGCTCG CCAGCAAGGC CAAGTTGAGC
CTCGACTGA
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| Protein sequence | MKRFLNAALL ATAALAAPLA VHAQAWPAKP VKIVVPSPPG GSTDQIARTI GQKLSQAWGQ
PVVVENRPGA GLTLGADYVA KSPADGYTLL MGAVHHSIAQ SVYKKLPYDF GKDLAPITVL
AIVPNVLIVS AANPAKNVAE LIAQAKANPG KLSYGSTGAG TAHHLIGEQF NDMAGTDILH
VAYKGSSPAL VDLMGGQTTM MFDTVASCLP LIKGGKLRPL AVATARRSSA LPEVPTLSEA
GLTGFDIATW FGLMAPAGTP KAVVDKIHAD STRILAMPEM KKQWLEMGAE PIGNTPEQMA
AQIQAEIAKF AALASKAKLS LD
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