| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6217 |
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| Symbol | |
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| ID | 7975433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 947502 |
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| End bp | 948470 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796787 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948046 |
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| Protein GI | 239820861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0641942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAGA TGTTCATGCT CGCTGCCGCC TGCCTGCTGG CCGCGGCTTC CGCGGTGCAC
GCCGACCCGG CCGCCTATCC GGCCAAGCCG GTTCGCCTCA TCGTGCCCTT TGCACCGGGC
GGCTCCACCG ACGTGCTGGC GCGGCTGCTG GCCGCGGCCC TCGCTCCCGA GCTGGGGCAG
CCCGTCATCG TCGAGAACAA GGCCGGCGCC GGCGGCAACA TCGGCGGCGA CTACGTCGCC
AAGTCGGCGC CCGACGGCTA CACGCTGCTG ATCGCGGCGG CCGGTCCCAC GGTGATCAAC
CCGAGCCTCT ACACAAAAAT GCCCTACGAC CCGGCCAAGG ACCTGCGGCC AGTGACGCTG
CTGATCCAGG AGCCCAACCT GATGGCGATC AACCCGAAGA TCCCCGCGAA GACGGTGCCC
GAGTTCATCG CCTATGCCAA GTCCAGGCCG AAGGAGGTCA GCTTCGGCTC CGCGGGCAAC
GGCAGCCCGT CCCACCTGGC CGGCGAATGG TTCAACCAGC TCACCGGCAC CACGATGGTC
CACGTCCCGT ACAAGGGCAC GGGCCCGGCA ATGAACGATC TGCTGGCCGG CCAGATCGCG
ATGATGATCG ACAACATGCC CGCGCTGTGG CCGCACGTGC AGTCGGGCAG GCTCAGGGCG
CTGGCGGTGT CCACCGACAA GCGGGCCACG GCCGCACCCG AGGTGCCGAC CGTCGCCGAG
TCGGTCAAGG GCTTCAGCTT TGGTGCATGG AAGGGCCTGA TGGTGCCCGC AGCAACGCCC
ACGGCCATCG TCGAGCGCCT GCACGCCGCC ACCACCAAGG CGCTGGAAAA GCCCGAGCTT
CGCCAACGGC TGCTGGCGCT GGGCGCCGAG CCGGTCGGCA ACACCCCGGC GCAGTTTGCC
GAGCTCATCA AGGCCGACAC GGCCTCGTGG GCCGCGCTGG TCAAGTCCAC CGGAACCAAG
CTGGACTGA
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| Protein sequence | MRKMFMLAAA CLLAAASAVH ADPAAYPAKP VRLIVPFAPG GSTDVLARLL AAALAPELGQ
PVIVENKAGA GGNIGGDYVA KSAPDGYTLL IAAAGPTVIN PSLYTKMPYD PAKDLRPVTL
LIQEPNLMAI NPKIPAKTVP EFIAYAKSRP KEVSFGSAGN GSPSHLAGEW FNQLTGTTMV
HVPYKGTGPA MNDLLAGQIA MMIDNMPALW PHVQSGRLRA LAVSTDKRAT AAPEVPTVAE
SVKGFSFGAW KGLMVPAATP TAIVERLHAA TTKALEKPEL RQRLLALGAE PVGNTPAQFA
ELIKADTASW AALVKSTGTK LD
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